| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0614 |
|---|
| Symbol | |
|---|
| ID | 6092031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | - |
|---|
| Start bp | 618361 |
|---|
| End bp | 620541 |
|---|
| Gene Length | 2181 bp |
|---|
| Protein Length | 726 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642487800 |
|---|
| Product | heavy metal translocating P-type ATPase |
|---|
| Protein accession | YP_001738650 |
|---|
| Protein GI | 170288412 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000274586 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGATC AGAGGACAAT GGAGGATCGT GCTGTGAAGA ATGAAGGGAT AAAGAAGACC
TTCACCGTAA CAGGAATGAC GTGTGCCACA TGTGCGAAAA CCGTTGAAAA GGCCCTGAGA
AAACTCGACG GGGTGAAATT CGCAGCGGTG AATCTGGCAA CCTCCACGGG TTTCATCGTG
GCAGAAAGAG AGTTATCCTT CGAGGAAATC AAAAAAGCGG TGGAAGAGGT AGGTTATGGA
ATCAGTACAG AATCACCAGA GGACGTGGAA AGAAAGCGTT ACGAAGAATC GAAAAAGAAT
TTGATCCTTG CCTGGCTCGT CACGGCTCCT CTTGCCCTCC TTATGATTTA TCACATGTTT
GTTTCCAAGG TGCCGTATTT CACCTGGATA GAGGTCTTCG CAGGTGCGTT CGTTACGTTC
TATGTGGGCA GAGGAACGAT CAGAGGGGCA TGGATAGCCC TCACACATAA GCACACGAAC
ATGGACACAC TCATCTTCTT CGGTGCGGTG ACTTCCTGGG TAACGGCTGT TCTCGACAGT
ATAGGACTTC CCGTGATGTC TTTCGGTGCC ATAGGTGCCA TGATCGTTGC GTTTCATATC
ACCGGACGTT TCATAGAGTC TTACCTGCGT GACAGGGCCA GCAAAGAAAT CAAAGCCCTT
CTGAAACTTC AGGCGAAAGA AGCCCGTGTC ATCACCGATG AAGGAGAAGT GATGATGCCG
ATAGAGGCGG TGAAAGAGGA TTTCATCGTA CTCGTGAAGC CCGGCGAAAG AATACCCGTG
GATGGGGTGA TCGTGGAAGG CCAGTCTTCA ATCGATGAGT CCGTAGTGAC GGGAGAATCC
ATACCGGTTT TGAAGAGAGA AAACGATGAA GTAATCGGTG GTTCTTTGAA TGTATCGAGC
CCTATCAAAA TAAAAGTCGC AAAAGTAGGA GAAGACACCT TTTTGTCTCA AATGATCAAA
TTGATTCAGG AAGCGCAGGG TTCGAAGGTG CCGATTCAGG CTCTCGCCGA TAGAATCACC
ATGTGGTTTG TCCCCACGAT CATCGTCCTT GCGATAGCCA GTGCCCTGGT GTGGTATTTC
AACTACGAAA CCTTCCTACC CTTTGTAGAA AAGGCAAGAG AAATCTTTCC CTGGATCATA
CAAACCAGTG ACCCGCTGAC CTTCTCTGTC TTCGTCTTCG TTGCAACGAT CGTCATAGCG
TGTCCATGTG CGCTTGGTCT TGCAACTCCC ATGGCCCTTG TGACTGGAAC GGGACTTGCG
GCAAAGAAAG GTCTTCTCAT AAGAAACGCC GAGGCGATTC AGACATCGAA GGACATTGGG
GTGGTTCTCA CAGACAAAAC AGGAACGCTC ACCGAGGGCA GTCCAAGGGT GGTGGATCAC
AACCTTTCCG ACGAACTGGT GAGGATCGTA GCGAGCGTGG AGAGAAACTC GAACCATCCT
CTTGCAAAGG CAATTTCTGA ACTTTCTCAG AATGTAGTTG AGGTAGAAAG CGTGGAGGAA
GTCCCAGGAG AAGGAGTGAG GGCACGTTAC AAGGGAGAAG AGTATTTTGT CGGGAAGCCT
CTGGATTATT CAAAGTACGA GTCTCTCCTG GAGGAAGGAA AGACCGTAGT TGAGGTGAGA
AGAAACGGTG AAGTTGTAGG ATTTCTCGCA ATAGAAGATC CGATCAGAGA AGACAGTCCC
GAGGCCGTGA GAAGACTCAG GGAGATGGGA ATAGAACCTG TCATGATAAC GGGAGACAAT
GAAAAGACTG CAAAAGCGGT TGCAAGACGC CTTGGGATAG AGAAGTTCCA CGCGGGTGTG
AAACCTTCTG AGAAACTGGA CCTTGTGAGA TATTACCAGG CCCAGGGAAA GAAAGTTGCG
ATGGTGGGAG ACGGTATGAA CGACGCCGCT GCTTTGAAAG GGGCAGATGT TGGAATAGCG
ATAGGTTCGG GAACAGACCT TGCCATCGAC AGCGCAGACA TCATCATAAC AAAGGGCGGT
ATATCGAAAG TCGTCGATGC GATAGAAATA TCAAGAAAGA CTTTCAAAAT CATAAAACAG
AACCTGTTCT GGGCCTTCTT CTACAATGTG ATAGCCATTC CAATGGCGAT GATGGGATTG
CTTCATCCGG TGATCGCAGA ACTCGCCATG GCTTTCAGTT CCATCACTGT GACTCTCAAC
TCTATGAGGG TGAGAGAGTG A
|
|---|
| Protein sequence | MADQRTMEDR AVKNEGIKKT FTVTGMTCAT CAKTVEKALR KLDGVKFAAV NLATSTGFIV
AERELSFEEI KKAVEEVGYG ISTESPEDVE RKRYEESKKN LILAWLVTAP LALLMIYHMF
VSKVPYFTWI EVFAGAFVTF YVGRGTIRGA WIALTHKHTN MDTLIFFGAV TSWVTAVLDS
IGLPVMSFGA IGAMIVAFHI TGRFIESYLR DRASKEIKAL LKLQAKEARV ITDEGEVMMP
IEAVKEDFIV LVKPGERIPV DGVIVEGQSS IDESVVTGES IPVLKRENDE VIGGSLNVSS
PIKIKVAKVG EDTFLSQMIK LIQEAQGSKV PIQALADRIT MWFVPTIIVL AIASALVWYF
NYETFLPFVE KAREIFPWII QTSDPLTFSV FVFVATIVIA CPCALGLATP MALVTGTGLA
AKKGLLIRNA EAIQTSKDIG VVLTDKTGTL TEGSPRVVDH NLSDELVRIV ASVERNSNHP
LAKAISELSQ NVVEVESVEE VPGEGVRARY KGEEYFVGKP LDYSKYESLL EEGKTVVEVR
RNGEVVGFLA IEDPIREDSP EAVRRLREMG IEPVMITGDN EKTAKAVARR LGIEKFHAGV
KPSEKLDLVR YYQAQGKKVA MVGDGMNDAA ALKGADVGIA IGSGTDLAID SADIIITKGG
ISKVVDAIEI SRKTFKIIKQ NLFWAFFYNV IAIPMAMMGL LHPVIAELAM AFSSITVTLN
SMRVRE
|
|---|
| |