| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0605 |
|---|
| Symbol | |
|---|
| ID | 6092021 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | - |
|---|
| Start bp | 610868 |
|---|
| End bp | 611794 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 642487790 |
|---|
| Product | DNA methylase N-4/N-6 domain-containing protein |
|---|
| Protein accession | YP_001738641 |
|---|
| Protein GI | 170288403 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0863] DNA modification methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000183696 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGAGAA GAAAATCAAC AAGAACCAGT TCTTTTGGAG TAAAAGGCCG GGAAAGCCAT
GATTCATCTC CATTTTATAG TAGAGCGATC TATTCCAACT TTTCCCTTCC AAAACCTTCA
GAGGAAGATC TCATCGAGAA CCCACTTCCT GAAAATCTCT TAGACAAGGT CATTGAGGGG
GATGCCAGAG AAGTTCTGAA AAAAATACCT GACTGTTCGA TACATCTCAT GGTGACTTCA
CCTCCGTACA ATGTAGGGAA AGAATACGAT GAAGATATGA CTCTTGATGA ATACCTTGAA
TTCATAGAAG AAATCATGAA AGAAGTGTAC AGGGTTCTCG TCTGGGGTGG AAGAGCCTGT
TTTAATGTAG CAAATCTTGG AAGAAAACCG TACATTCCTC TTCATGCGTA TCTCATCCAT
TTGTTTGAAA AGATAGGCTT TTTGATACGT GGAGAGATCA TTTGGGACAA AGGGGAAGCG
GTGAGTGGTT CTTCGACTGC GTGGGGTTCG TGGATGTCTC CTGTAAATCC CGTGCTAAGA
GATCAACACG AATATATAAT TGTAATGAGT AAAGGAGATC TAAAGCGAAG AAAACCCAGT
GATAGAGAAG CAAAATCAAC AATAACAAGG GAAGAATTTT TAGAATTCAC AAGGAGTGTG
TGGAAATTTC CACCAGAGTC AGCTAAGAGA GTAGGACATC CTGCCCCCTT TCCTGAGGAA
CTTCCTTACC GTTGTATACA GCTCTACACC TTTAAAGGAG ATGTCGTTCT CGATCCTTTT
GCTGGTGTAG GAACAACTTG TGTGGCTGCC GTTAAAACAG GACGGCATTT TGTTGGAATA
GAGATAAATC CCGAATACGT AAAAAAGGCC GAAGAAAGGG TAAAGGATAT TCTCAGCAAA
CCTACTCTTT TTGAAGATCA CTGTTGA
|
|---|
| Protein sequence | MKRRKSTRTS SFGVKGRESH DSSPFYSRAI YSNFSLPKPS EEDLIENPLP ENLLDKVIEG
DAREVLKKIP DCSIHLMVTS PPYNVGKEYD EDMTLDEYLE FIEEIMKEVY RVLVWGGRAC
FNVANLGRKP YIPLHAYLIH LFEKIGFLIR GEIIWDKGEA VSGSSTAWGS WMSPVNPVLR
DQHEYIIVMS KGDLKRRKPS DREAKSTITR EEFLEFTRSV WKFPPESAKR VGHPAPFPEE
LPYRCIQLYT FKGDVVLDPF AGVGTTCVAA VKTGRHFVGI EINPEYVKKA EERVKDILSK
PTLFEDHC
|
|---|
| |