Gene TRQ2_0601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_0601 
Symbol 
ID6092017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand+ 
Start bp607762 
End bp608367 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content47% 
IMG OID642487786 
Productorotidine 5'-phosphate decarboxylase 
Protein accessionYP_001738637 
Protein GI170288399 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0284] Orotidine-5'-phosphate decarboxylase 
TIGRFAM ID[TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACCTG TTCTCAGTCT GGACATGGAA GATCCTATCA GATTCATCGA CGAAAACGGC 
AGTTTCGAAG TGGTGAAGGT GGGGCACAAC CTCGCCGTAC ACGGAAAAAA GATCTTCGAC 
GAACTCGCAA AGAGGAATTT GAAGATAATC CTTGACCTGA AGTTCTGTGA TATCCCTTCA 
ACGGTGGAAC GTTCCATAAA GAGCTGGGAT CATCCGGCGA TCATAGGTTT CACAGTTCAC 
TCCTGCGCTG GATACGAAAG CGTGGAGAGA GCCCTCAGGA CAACAGACAA ACATGTGTTC 
GTTGTGGTGA AACTCACTTC CATGGAAGGA TCTCTCGAGG ATTACATGGA CAGGATAGAA 
AAACTGAACA AGCTTGGGTG TGATTTCGTG CTTCCTGGTC CATGGGCAAA GGCTCTGAGA 
GAGAAGATAA AAGGCAAAAT TCTCGTTCCC GGCATCAGAA TGGAAGTGAA AGCAGACGAT 
CAAAAGGACG TCGTAACGCT CGAAGAAATG AAGGGAATAG CGGATTTTGC TGTGCTCGGA 
AGAGAGATCT ACCTGAGCGA AAATCCCGGA GAAAAGATCA AAAGAATAAA GGAGATGAGA 
CTGTGA
 
Protein sequence
MTPVLSLDME DPIRFIDENG SFEVVKVGHN LAVHGKKIFD ELAKRNLKII LDLKFCDIPS 
TVERSIKSWD HPAIIGFTVH SCAGYESVER ALRTTDKHVF VVVKLTSMEG SLEDYMDRIE 
KLNKLGCDFV LPGPWAKALR EKIKGKILVP GIRMEVKADD QKDVVTLEEM KGIADFAVLG 
REIYLSENPG EKIKRIKEMR L