Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0590 |
Symbol | |
ID | 6092006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 596276 |
End bp | 597541 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642487775 |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_001738626 |
Protein GI | 170288388 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.552506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAGGTAC TTCCGGCGAA GAAGGTTGAA GGAGTGCTGA GCGTTCCTCC GGACAAATCC ATAACTCACA GGGCTCTCAT TCTGTCCGCT TTGGCGGAAA CGGAAAGCAC CCTGTACAAC CTCTTGAGGT GTCTCGACAC AGAGAGAACC CACGATATTC TCGAAAAACT CGGTACACGT TTTGAAGGCG ATTGGGAAAA GATGAAGGTC TTTCCGAAGC CCTTCGCTGA GCCAATAGAA CCTCTCTTCT GTGGAAACTC CGGAACAACC ACGAGGTTGA TGAGTGGAGT TCTTGCTTCA TACGAGATGT TCACAGTGCT TTACGGGGAT TCTTCTCTTT CCAGAAGGCC GATGAGAAGA GTGATCGAAC CTCTGGAGAT GATGGGAGCG CGTTTCATGG CGAGGCAGAA CAACTACCTT CCCATGGCTA TCAAGGGAAA TCACCTTTCC GGTATCAGCT ATAAAACACC GGTGGCGAGC GCTCAAGTGA AGAGCGCGGT TCTTCTGGCG GGGCTCAGAG CCAGCGGACG AACAATCGTT ATCGAACCAG CAAAAAGCAG AGATCACACG GAAAGGATGC TCAAAAACCT CGGTGTTCCC GTCGAGGTGG AGGGAACACG TGTGGTTCTG GAGCCTGCTA CCTTCAGGGG TTTCACGATG AAAGTCCCTG GTGATATCTC GTCGGCTGCT TTCTTCGTGG TTCTCGGCGC CATTCATCCC AACGCTCGAA TCACAGTAAC GGACGTTGGC CTGAATCCCA CCCGAACGGG ACTCCTCGAA GTTATGAAAC TCATGGGAGC CAACCTGGAG TGGGAGATCA CGGAAGAAAA TCTTGAACCG ATAGGAACTG TGAGGGTTGA GACATCTCCA AACCTGAAAG GTGTGGTTGT TCCCGAACAC CTCGTACCTC TCATGATAGA TGAACTGCCT CTTGTGGCGC TTCTCGGTGT TTTTGCGGAA GGAGAAACGG TTGTGAGAAA CGCGGAGGAG TTGAGAAAGA AGGAATCCGA CAGGATAAGG GTTCTGGTGG AAAACTTCAA ACGGCTCGGT GTCGAAATAG AAGAGTTCAA AGATGGTTTC AAGATCGTTG GAAAGCAGAG CATAAAAGGT GGATCGGTGG ATCCAGAAGG CGACCACAGA ATGGCTATGC TCTTTTCCAT AGCAGGGCTC GTGAGTGAAG AGGGGGTTGA TGTGAAAGAT CACGAATGCG TGGCGGTGTC TTTCCCGAAC TTTTACGAAC TGCTGGAGAG AGTGGTGATA TCATGA
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Protein sequence | MKVLPAKKVE GVLSVPPDKS ITHRALILSA LAETESTLYN LLRCLDTERT HDILEKLGTR FEGDWEKMKV FPKPFAEPIE PLFCGNSGTT TRLMSGVLAS YEMFTVLYGD SSLSRRPMRR VIEPLEMMGA RFMARQNNYL PMAIKGNHLS GISYKTPVAS AQVKSAVLLA GLRASGRTIV IEPAKSRDHT ERMLKNLGVP VEVEGTRVVL EPATFRGFTM KVPGDISSAA FFVVLGAIHP NARITVTDVG LNPTRTGLLE VMKLMGANLE WEITEENLEP IGTVRVETSP NLKGVVVPEH LVPLMIDELP LVALLGVFAE GETVVRNAEE LRKKESDRIR VLVENFKRLG VEIEEFKDGF KIVGKQSIKG GSVDPEGDHR MAMLFSIAGL VSEEGVDVKD HECVAVSFPN FYELLERVVI S
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