Gene TRQ2_0552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_0552 
Symbol 
ID6091968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp554282 
End bp555292 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content44% 
IMG OID642487738 
ProductABC-2 type transporter 
Protein accessionYP_001738589 
Protein GI170288351 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTGAGT TTTTGGCTCT GTTCTCTGCT ATGTGGAAAG AATCGTGGAG GGATAAAATT 
TCCACTTTTT TCAGCATTGC TTTTCCCGTC ATGTTTCTTC TGATTTTTGG TTTTCTTTTT
GGCGGTTCCG GCAATTCTGT GAAAACAGCA GTTGTGACCG TCGATTACGA TCTTTCGGAT
TTTGGAGATG TTTACACCTC GCTCGAGGAG TTGAAGGGCT ACTACCACGA AGTGGCGGTG
GTGGAGAAAG AAAGAATCAT CTTTATAAGA AACACAACGG ACGAATACTA TCAATCGCTT
CTCGACTCCT GGGAAATCTC CCTCAAAAAC AAGGTCACAA GGCTCCTCAA CGGTCTGAAT
CCCGTCATCA TGGTGAAAAA AGAAGTTCTG AAAACCGCAA GAGAGCTCAC ATCTTTCGAT
TATACCCTCA CGGGTGTGAT CGCCGTATCT CTACTCTCGA TCGGGCTCTT TGGAACCGTG
GACGTGTTCT CCCGCTATCG TGAAAGAGGC TTTTTGAAGA GGCTCAAAGC AACTCCCGTT
GGAAACTTTT CCTTTGTCTT TGGTCTCATC TCAGCGAGGA TGTTCTACGG AATTTTGAGC
ACCGCTCTCA TAATGCTGCT GGGAACTTTG ATCTTTAAAG CAAGCTACGA ACTGAACGTG
TTTCTCTTTT TGATATCCGT CGTCAGTTCT GTTCTATCCT TCATCGCGCT TGGAGCTTTG
ATATCAATTC TGTTCAAGAA ATCCGATGTG GCAACGGATG CTGCTGTGAT TCTCTTCACC
ATTATGATGT TTCTAACAGG TGTTTATTTT CCGGTCTCGT TCCTCCCTGA TTATCTGAGA
GTTGTCTCTT ACTTCCTACC TGTGAAATAT GGTGTGGAAC TCATCAGGTA CTCATTGGGC
TTTGAGATAT TTCCGTTCAG CAGGTACCTT ATCACCGCAG TGATCATGTT CTTAGCTGGT
CTTATGTTTG TCTTTTACAC AGCGTCACTC GTTCTGAGAA AAGAAGACTA A
 
Protein sequence
MSEFLALFSA MWKESWRDKI STFFSIAFPV MFLLIFGFLF GGSGNSVKTA VVTVDYDLSD 
FGDVYTSLEE LKGYYHEVAV VEKERIIFIR NTTDEYYQSL LDSWEISLKN KVTRLLNGLN
PVIMVKKEVL KTARELTSFD YTLTGVIAVS LLSIGLFGTV DVFSRYRERG FLKRLKATPV
GNFSFVFGLI SARMFYGILS TALIMLLGTL IFKASYELNV FLFLISVVSS VLSFIALGAL
ISILFKKSDV ATDAAVILFT IMMFLTGVYF PVSFLPDYLR VVSYFLPVKY GVELIRYSLG
FEIFPFSRYL ITAVIMFLAG LMFVFYTASL VLRKED