Gene TRQ2_0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_0540 
Symbol 
ID6091956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp540422 
End bp541159 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content46% 
IMG OID642487726 
Productglutamate synthase alpha subunit 
Protein accessionYP_001738577 
Protein GI170288339 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0070] Glutamate synthase domain 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.800593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTAGAA TAGACGCGAA AGGCCTCCAC TACAAAAAAC TGAACGACTT GATCTGGGAA 
GCGATAGAAA ACGGAGAAGA AGAAATAGTT CTGGACAACG TTTGCGGTCA GAGATACATC
GGAGCCGGAA TCAGAAAGAA AGTAAAAATA GAAATAAACG GCGTTCCGGG GAACGATCTT
GGTGTTTTCA TGGACGGTCC TGAAATCATC GTGAACGGAA ACGCACAAGA CGGTGTAGGA
AACACCATGA ACGCAGGAAA AATCGTGGTT CACGGGCACG CGGGCGACAT CATAGGATAC
GCCATGAGGG GTGGACACAT CTACATAAAA AGAAATGCTG GATATCGAGT GGGAATACAC
ATGAAGGCCT ACAAAGAAAA TTACCCCGTT GTCGTCATAG GAGGCTTTGC GAGAGACTTC
CTCGGAGAAT ACATGGCAGG AGGACTTCTC ATAGTGCTGG GACTGGAAAA AGATGAAGAT
GGAAACATCG CAGGAAACTA CGTTGGAACA GGAATGCACG GTGGGGAGAT CTTTCTCAGA
GGAACCGTAG AAGAGCACAA ACTCGGAAAA GAAGTGAAAA TCTTCCAGCC CACCGAAGAG
GATATCAACA GGATCAAGCC TTATGTTGAA GAGTTCTGCA GACTCTTTGA CTACGACTCA
GAGGAGATTC TGAACGGAGA ATTCATCATC CTCAAACCCT ACACACACAG ACCGTACGGA
AGATTGTATG CGTATTAA
 
Protein sequence
MVRIDAKGLH YKKLNDLIWE AIENGEEEIV LDNVCGQRYI GAGIRKKVKI EINGVPGNDL 
GVFMDGPEII VNGNAQDGVG NTMNAGKIVV HGHAGDIIGY AMRGGHIYIK RNAGYRVGIH
MKAYKENYPV VVIGGFARDF LGEYMAGGLL IVLGLEKDED GNIAGNYVGT GMHGGEIFLR
GTVEEHKLGK EVKIFQPTEE DINRIKPYVE EFCRLFDYDS EEILNGEFII LKPYTHRPYG
RLYAY