Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0540 |
Symbol | |
ID | 6091956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 540422 |
End bp | 541159 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642487726 |
Product | glutamate synthase alpha subunit |
Protein accession | YP_001738577 |
Protein GI | 170288339 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0070] Glutamate synthase domain 3 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.800593 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTAGAA TAGACGCGAA AGGCCTCCAC TACAAAAAAC TGAACGACTT GATCTGGGAA GCGATAGAAA ACGGAGAAGA AGAAATAGTT CTGGACAACG TTTGCGGTCA GAGATACATC GGAGCCGGAA TCAGAAAGAA AGTAAAAATA GAAATAAACG GCGTTCCGGG GAACGATCTT GGTGTTTTCA TGGACGGTCC TGAAATCATC GTGAACGGAA ACGCACAAGA CGGTGTAGGA AACACCATGA ACGCAGGAAA AATCGTGGTT CACGGGCACG CGGGCGACAT CATAGGATAC GCCATGAGGG GTGGACACAT CTACATAAAA AGAAATGCTG GATATCGAGT GGGAATACAC ATGAAGGCCT ACAAAGAAAA TTACCCCGTT GTCGTCATAG GAGGCTTTGC GAGAGACTTC CTCGGAGAAT ACATGGCAGG AGGACTTCTC ATAGTGCTGG GACTGGAAAA AGATGAAGAT GGAAACATCG CAGGAAACTA CGTTGGAACA GGAATGCACG GTGGGGAGAT CTTTCTCAGA GGAACCGTAG AAGAGCACAA ACTCGGAAAA GAAGTGAAAA TCTTCCAGCC CACCGAAGAG GATATCAACA GGATCAAGCC TTATGTTGAA GAGTTCTGCA GACTCTTTGA CTACGACTCA GAGGAGATTC TGAACGGAGA ATTCATCATC CTCAAACCCT ACACACACAG ACCGTACGGA AGATTGTATG CGTATTAA
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Protein sequence | MVRIDAKGLH YKKLNDLIWE AIENGEEEIV LDNVCGQRYI GAGIRKKVKI EINGVPGNDL GVFMDGPEII VNGNAQDGVG NTMNAGKIVV HGHAGDIIGY AMRGGHIYIK RNAGYRVGIH MKAYKENYPV VVIGGFARDF LGEYMAGGLL IVLGLEKDED GNIAGNYVGT GMHGGEIFLR GTVEEHKLGK EVKIFQPTEE DINRIKPYVE EFCRLFDYDS EEILNGEFII LKPYTHRPYG RLYAY
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