| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0533 |
|---|
| Symbol | |
|---|
| ID | 6091948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | + |
|---|
| Start bp | 533245 |
|---|
| End bp | 533799 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642487718 |
|---|
| Product | thymidine kinase |
|---|
| Protein accession | YP_001738570 |
|---|
| Protein GI | 170288332 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1435] Thymidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00168985 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGGAA AATTGACCGT AATCACGGGT CCCATGTACT CCGGAAAGAC AACCGAGCTT
CTCTCCTTTG TGGAGATATA CAAACTGGGA AAGAAAAAAG TCGCTGTTTT TAAACCAAAA
ATCGACAGCA GATATCACTC CACCATGATC GTCTCTCATT CTGGAAACGG TGTTGAAGCA
CACGTGATAG AACGTCCTGA AGAAATGCGA AAGTACATCG AAGAAGACAC CCGGGGAGTT
TTCATAGATG AGGTGCAGTT CTTCAGCCCC GGTTTGTTTG AAGTGGTGAA AGACCTCCTT
GACAGAGGAA TAGATGTTTT CTGTGCGGGA CTCGATCTCA CACACAAGCA AAATCCCTTT
GAAACAACCG CTCTGCTTCT CAGCCTCGCC GACACCGTGA TCAAAAAGAA GGCAGTCTGT
CACCGATGTG GTGAGTACAA CGCTACTCTC ACATTAAAAG TAGCAGGAGG CGAAGAAGAA
ATAGACGTTG GGGGACAGGA GAAATACATT GCGGTCTGCA GGGATTGTTA CAACACCCTC
AAAAAACGAG TTTGA
|
|---|
| Protein sequence | MSGKLTVITG PMYSGKTTEL LSFVEIYKLG KKKVAVFKPK IDSRYHSTMI VSHSGNGVEA
HVIERPEEMR KYIEEDTRGV FIDEVQFFSP GLFEVVKDLL DRGIDVFCAG LDLTHKQNPF
ETTALLLSLA DTVIKKKAVC HRCGEYNATL TLKVAGGEEE IDVGGQEKYI AVCRDCYNTL
KKRV
|
|---|
| |