| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0511 |
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| Symbol | |
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| ID | 6091926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga sp. RQ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010483 |
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| Strand | - |
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| Start bp | 512179 |
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| End bp | 513276 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642487698 |
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| Product | Pectate lyase/Amb allergen |
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| Protein accession | YP_001738550 |
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| Protein GI | 170288312 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3866] Pectate lyase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000797817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGTTTT CTCGTGTGGT TTCTTTAGTA CTGCTTCTTG TTTTCACAGC TGTTCTAACT
GGTGCTGTAA AAGCTTCTCT CAATGACAAA CCTGTGGGAT TTGCATCCGT ACCGACGGCG
GATTTACCGG AGGGCACAGT TGGTGGATTG GGTGGTGAGA TCGTTTTCGT CAGAACAGCG
GAAGAACTGG AGAAATACAC AACAGCAGAA GGAAAGTACG TAATAGTCGT TGATGGAACG
ATCGTTTTTG AACCAAAGAG AGAAATTAAA GTTCTTTCAG ACAAAACGAT CGTGGGAATA
AACGATGCAA AGATAGTCGG TGGAGGTCTT GTAATAAAGG ATGCCCAGAA TGTGATCATA
AGAAATATTC ATTTTGAGGG TTTTTACATG GAGGACGATC CTCAAGGTAA GAAGTATGAT
TTCGACTATA TCAACGCAGA AAATTCTCAT CATATCTGGA TCGACCACTG TACCTTCGTC
AACGGCAACG ATGGTGCAGT GGATATTAAA AAATACTCAA ACTACATCAC TGTTTCTTGG
TGTAAATTTG TGGATCACGA CAAAGTCTCC CTCGTTGGTT CCTCCGACAA AGAAGATCCG
GAACAGGCAG GTCAGGCTTA CAAGGTCACG TACCACCATA ACTACTTCAA GAACTGTATT
CAGAGAATGC CCAGAATTAG ATTTGGAATG GCACACGTGT TCAATAACTT CTACAGCATG
GGCCTGAGAA CAGGTGTCTC TGGAAATGTC TTTCCCATTT ATGGCGTGGC TTCAGCGATG
GGAGCAAAAG TTCACGTTGA GGGAAACTAC TTCATGGGAT ACGGTGCTGT CATGGCAGAA
GCCGGCATTG CGTTCCTTCC CACCAGAATC ATGGGGCCTG TGGAAGGTTA TCTGACACTG
GGTGAGGGCG ATGCGAAGAA CAAGTTCTAC TACTGCAAGG AACCTGAAAC CCGTCCTGTT
GAGGAAGGAA AGCCTGCTTT TGATCCTCAC GAATACTACG ACTACACACT CGATCCCGTC
GATGATGTTC CAAAGATAGT AGTGGATGGT GCAGGAGCAG GCAAACTGGT TTTTGAAGAT
CTCATGTCTT CTAAATGA
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| Protein sequence | MRFSRVVSLV LLLVFTAVLT GAVKASLNDK PVGFASVPTA DLPEGTVGGL GGEIVFVRTA
EELEKYTTAE GKYVIVVDGT IVFEPKREIK VLSDKTIVGI NDAKIVGGGL VIKDAQNVII
RNIHFEGFYM EDDPQGKKYD FDYINAENSH HIWIDHCTFV NGNDGAVDIK KYSNYITVSW
CKFVDHDKVS LVGSSDKEDP EQAGQAYKVT YHHNYFKNCI QRMPRIRFGM AHVFNNFYSM
GLRTGVSGNV FPIYGVASAM GAKVHVEGNY FMGYGAVMAE AGIAFLPTRI MGPVEGYLTL
GEGDAKNKFY YCKEPETRPV EEGKPAFDPH EYYDYTLDPV DDVPKIVVDG AGAGKLVFED
LMSSK
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