| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0473 |
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| Symbol | |
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| ID | 6091883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga sp. RQ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010483 |
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| Strand | + |
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| Start bp | 460876 |
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| End bp | 461811 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642487655 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001738512 |
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| Protein GI | 170288274 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTTT GGAGAGTCGA AAAAAGAGAA GAGGGCTGGA GACTGGATCA GTTTTTGAAG
GAGAAGACAC CGTCGTGGAT TTCGAGATCA CTGATTCAAA AAGCGATAAA AGAGGGCAAA
GTGAAGGTCA ACGGTCAGAT TAAAAAGCCA AGTTACAAGT TGAAAGAGGG TGAAATAGTA
GAGGTTGACC TCCCTGAAAA GCCGCAGGAA GCGACCGTTC AACCCGAAGA GATAGAATTG
AAAGTTCTTT ATGAAGATAG AGACATCGTA GTTATCGACA AACCCGGAGA CATGATCGTT
CATCCTGTTC CCTCCAAACT CAGCGGAACT CTCGTGAATG CCCTTCTTCA TCACTGCAAA
GATCTTCAGG GAGTGGGAGG AAAGCTCCGG CCGGGGATAG TTCACAGACT CGACAAAGAG
ACCTCCGGTG TTATAGTGGT TGCCAAGAAC GACTTTGCTC ATCAAAGCCT TTCGAAGCAG
TTCAAAGATC GAAAGGTGAA GAAGACCTAT ATACTCCTAG TGAAAGGTAG AGTGAAGAGT
GATGAAGGAG TTATAGACCT TCCTCTCGCA AGGCACCCCG TTCTGAGGAT AAAAATGGCT
GTCGTTGAAA CAGGGAAGGA AGCGATCACG GAGTACAGAG TTCTGAAAAG GTTCGATGAT
GTTGCTACAC TCGTTCTCGC CTTTCCTAAA ACAGGTAGAA CGCACCAGAT CAGAGTACAC
ATGAAAAGCC TTGGGCATCC GATCATGGGA GACAAAATCT ACGGGAAGCC GAAAGAGGAT
GAGATCTTCG GAATAAAAAG GCAGATGCTT CACGCCCTGA AACTCGGTTT CTTCCACCCT
CGAACGGGCA AATGGATGGA GTTCGTCTCA CCTCTGCCAG AGGACTTCAA AGAAGCCATC
AGAAGGATCC ATGAGTACGT GAGGGAAAGA TCATGA
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| Protein sequence | MKVWRVEKRE EGWRLDQFLK EKTPSWISRS LIQKAIKEGK VKVNGQIKKP SYKLKEGEIV
EVDLPEKPQE ATVQPEEIEL KVLYEDRDIV VIDKPGDMIV HPVPSKLSGT LVNALLHHCK
DLQGVGGKLR PGIVHRLDKE TSGVIVVAKN DFAHQSLSKQ FKDRKVKKTY ILLVKGRVKS
DEGVIDLPLA RHPVLRIKMA VVETGKEAIT EYRVLKRFDD VATLVLAFPK TGRTHQIRVH
MKSLGHPIMG DKIYGKPKED EIFGIKRQML HALKLGFFHP RTGKWMEFVS PLPEDFKEAI
RRIHEYVRER S
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