Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0462 |
Symbol | |
ID | 6091872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 452793 |
End bp | 453674 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642487644 |
Product | pyridoxal biosynthesis lyase PdxS |
Protein accession | YP_001738501 |
Protein GI | 170288263 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.236394 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATCA AAAAGGGTAC CTGGATCATA AAGAAGGGTT TTGCGGAGAT GTTCAAAGGC GGTGTCATCA TGGACGTCAC CTCTGCTGAA CAGGCCAAGA TCGCAGAAGA AGCGGGAGCC GTTGCGGTAA TGGCCCTCGA AAGAGTTCCG GCCGATATCA GAAAAGAGGG CGGAGTCGCC AGAATGGCAA GCATCGCAAA GATCAGGGAA ATCATGGAGG CAGTATCCAT CCCTGTGATG GCGAAGGTGA GAATCGGTCA CATAGCCGAA GCAAAGATAC TGGAGGAACT CGGAGTTGAC TTCATCGACG AATCCGAAGT CCTTACACCA GCTGACGACA GGTTCCACAT CAACAAACAC GAATTCAAAG TGCCCTTTGT CTGCGGTGCA AGGGACCTGG GAGAAGCTCT CAGAAGAATA GCAGAAGGTG CAGCCATGAT CAGAACGAAG GGAGAAGCCG GAACGGGAAA CGTTGTAGAA GCAGTGAAGC ACATGAGAAG GGTGATGGAA CAGATAAAAC AGGTGACGAA GATGGAAGAC GAAGAACTCG TCGCTTACGG AAAAGAGATA GGAGCTCCCG TCGAGCTTCT CAGAGAGGTC AAAAGACTTG GAAGACTTCC CGTCGTGAAC TTCGCAGCGG GTGGTGTGGC AACTCCTGCG GATGCGGCTC TCATGATGAT GCTCGGAGCA GATGGAGTGT TCGTGGGATC CGGTATCTTC AAATCCAAGG ATCCAAGAAA GATGGCGAAA GCCATGGTGC TGGCCGTTAC CTACTGGGAC AATCCAAGGA TACTCCTCAA GATCTCCGAA GACATAGGAG AGCCGATGAG AGGGCTCGAT GTCGAAGAAC TCGAAGTGAG AATGCAGGAG AGAGGGTGGT AA
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Protein sequence | MEIKKGTWII KKGFAEMFKG GVIMDVTSAE QAKIAEEAGA VAVMALERVP ADIRKEGGVA RMASIAKIRE IMEAVSIPVM AKVRIGHIAE AKILEELGVD FIDESEVLTP ADDRFHINKH EFKVPFVCGA RDLGEALRRI AEGAAMIRTK GEAGTGNVVE AVKHMRRVME QIKQVTKMED EELVAYGKEI GAPVELLREV KRLGRLPVVN FAAGGVATPA DAALMMMLGA DGVFVGSGIF KSKDPRKMAK AMVLAVTYWD NPRILLKISE DIGEPMRGLD VEELEVRMQE RGW
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