Gene TRQ2_0439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_0439 
Symbol 
ID6091845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand+ 
Start bp428508 
End bp429068 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content46% 
IMG OID642487617 
ProductDNA polymerase III, epsilon subunit 
Protein accessionYP_001738478 
Protein GI170288240 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATGGA ACGACACCGT TTTTTGCGTC GTAGACACAG AAACCACGGG AACCGATCCC 
TTTGCCGGAG ACCGGATAGT TGAAATAGCC GCTGTTCCTG TCTTCAAGGG GAAGATCTAC 
AGGAACAAAG CGTTTCACTC TCTCGTGAAT CCCAGAATAA GAATCCCTGC GCTGATTCAG 
AAAGTTCACG GTATCAGCAA CATGGACATT GAGGAAGCAC CTGATATGGA TGCGGTTTAC 
AATCTCTTCA GAGACTACGT GAAAGGGACG GTGCTCGTGT TTCACAACGC CAACTTCGAC 
CTCACTTTTC TGGATATGAT GGCAAAAGAA ACGGGAAATT TTCCAATAAC GAATCCCTAC 
ATTGACACAC TCGATCTTTC AGAAGAGATC TTTGGAAGAC CCCATTCTCT CAAATGGCTC 
TGCGAAAGAC TTGGGATAAA AACCACGATA CGGCACCGTG CACTTCCAGA TGCCCTGGTG 
ACCGCAAGAG TTTTTGTGAA GCTTGTTGAA TTTCTTGGTG AAAACAGAGT CAACGAATTC 
ATCCGTGGAA AACGGGGGTA A
 
Protein sequence
MIWNDTVFCV VDTETTGTDP FAGDRIVEIA AVPVFKGKIY RNKAFHSLVN PRIRIPALIQ 
KVHGISNMDI EEAPDMDAVY NLFRDYVKGT VLVFHNANFD LTFLDMMAKE TGNFPITNPY 
IDTLDLSEEI FGRPHSLKWL CERLGIKTTI RHRALPDALV TARVFVKLVE FLGENRVNEF 
IRGKRG