| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0433 |
|---|
| Symbol | |
|---|
| ID | 6091839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | + |
|---|
| Start bp | 423051 |
|---|
| End bp | 423992 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642487611 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001738472 |
|---|
| Protein GI | 170288234 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0859322 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACCAGG AATTCAAAAG AATAATGAAG AGATTTTTTA GAGATCCATC CGCCATCATA
GGGTTCTCTC TGGTGCTCTT CTTTGTGGTG ATAGCCATTC TCGCGCCTGT TATAGCTCCT
CCCATTCACC CGCTCACCAG AGCCAAGCTA CCCGATCCTT ACTTGATGCC CGTGGTGAGC
TGGAATCAGA GCCCACAACC CCCTACCACG AAAGAGGATG CCCTGGCGAA GAATCCCAAC
AGAGAACCTA TACGCTGTGT TGATTATCAT CCATTCGGTG TCATTGGTGG CCGTGATATT
CTATACGGAA TCGTCTGGGG CACAAGAACG GCTTTCAAGA TAGGTCTCAT AGTCACACTC
GCAAGACTCC TGATAGGAGT GTTCATAGGT TCAATCTCAG GTTACTTTGG AGGATGGATA
GATGAGGTTC TCATGAGGAT CACCGATATC TTTCTCTCTA TTCCTTTCCT CATAGCGGCT
GTTGTGCTGA CAACCGTTCT CGGGACAGGT CTCGACAAGG TTATGATAGC GATGATCGTG
TTTGGATGGA TGGGAGCGGC AAGGCTCATC AGAGGAAACA TTCTTCAGGT GAGGGAAGAA
CAATTCGTTC TGGCAGCGAA AGCAATAGGT GTGCCCGATT TTCTCATCAT ACTGAAACAC
GTTCTTCCGA ATACCATTTT CCCCGTCCTG ATATGGGCTT CCATGAACAT GGGATCTCTC
GTGATAACGG CCGCTGTGCT CAGTTTCTTG GGACTCGGTG CCCCCCAGGG ATACGCCGAC
TGGGGATCCA TCCTCAGTTA CTCGAGAGAC TGGATGATGG AGATAGGAAA GCACTGGTAC
GCCCTCGTTT ATCCCGGTAC CGCTATGGTT CTCTTCGTTC TGGGATGGAA TCTGCTGGGC
GATGCGCTCA GAGACGCTTT CGATCCAAGG CTAAAATTCT AA
|
|---|
| Protein sequence | MNQEFKRIMK RFFRDPSAII GFSLVLFFVV IAILAPVIAP PIHPLTRAKL PDPYLMPVVS
WNQSPQPPTT KEDALAKNPN REPIRCVDYH PFGVIGGRDI LYGIVWGTRT AFKIGLIVTL
ARLLIGVFIG SISGYFGGWI DEVLMRITDI FLSIPFLIAA VVLTTVLGTG LDKVMIAMIV
FGWMGAARLI RGNILQVREE QFVLAAKAIG VPDFLIILKH VLPNTIFPVL IWASMNMGSL
VITAAVLSFL GLGAPQGYAD WGSILSYSRD WMMEIGKHWY ALVYPGTAMV LFVLGWNLLG
DALRDAFDPR LKF
|
|---|
| |