Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0429 |
Symbol | |
ID | 6091834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 417415 |
End bp | 419214 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642487607 |
Product | recombination factor protein RarA/unknown domain fusion protein |
Protein accession | YP_001738468 |
Protein GI | 170288230 |
COG category | [L] Replication, recombination and repair [R] General function prediction only |
COG ID | [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000753896 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTATTT CAGAAAAACC CTTGAATGAA CTGCTCAGGC CGAAAGATTT CGAGGATTTC GTCGGTCAGG ATCATATATT CGGCGATAAA GGGATTCTCC GGCGAACTTT AAAAACAGGC AACATGTTCT CCTCCATCCT TTATGGACCA CCGGGGTCTG GTAAGACCTC GGTTTTTTCA CTGCTGAAAA GGTATTTCAA CGGCGAGGTA GTTTATCTGA GCTCCACCGT TCACGGGGTT TCTGAAATAA AGAACGTTCT CAAAAGAGGA GAACAGCTGA GAAAATACGG AAAAAAACTG CTTCTTTTTC TCGATGAAAT ACACCGCCTG AACAAAAACC AGCAGATGGT CTTGGTTTCC CATGTTGAAC GAGGAGACAT CGTACTGGTT GCGACAACAA CTGAAAACCC AAGTTTTGCC ATCGTACCCG CACTTCTCTC AAGATGCAGG ATTCTTTACT TCAAAAAACT CTCTGACGAG GACCTGATGA AGATCTTGAA AAAAGCAACA GAGGTTCTCA ACATCGATCT GGAAGAAACG GTAGAGAAAG CCATAGTAAG GTATTCCGAA GGAGACGCCA GGAAACTCTT GAACACCCTG GAGATCGTCC ACCAGGCGTT CAAAAACAAG AGGGCAACTC TTGAAGATCT GGAAACTCTG CTGGGAAATG TGAGCGGGTA CACGAAGGAA TCACACTACG ATTTCGCTTC AGCCTTTATA AAGAGTATGA GGGGTAGCGA TCCAAACGCC GCCGTTTACT ACCTCGTCAA GATGATAGAG ATGGGAGAAG ACCCGCGATT CATAGCACGA AGAATGATCA TATTCGCCAG CGAAGACGTT GGACTCGCCG ACCCAAACGC TCTACATATC GCCGTTTCGA CCTCCATCGC TGTCGAACAC GTGGGACTTC CCGAATGCTT GATGAACCTT GTAGAGTGTG CCATCTACCT TTCCCTCGCT CCCAAGAGCA ATTCTGTTTA TCTTGCAATG AAAAAGGCCC AGGAACTTCT TGTGGAGGAC GTACCGCTTT TTTTGAGAAA TCCCGTCACC GAAGAAATGA AAAAGCGTGG ATACGGGGAA GGGTATCTTT ATCCTCATGA TTTCGGCGGC TTTGTGAAAA CGAACTATCT TCCAGAAAAG TTGAAAGGTG AGGTCATCTT CCAGCCAAAA AGAGTAGGTT TTGAGGAAGA ACTCTTTGAA AGGCTCAAAC GTCTTTGGCC CGAGAAGTAC GGGGGTGAAA GTATGGCCGA AGTGAGAAAA GAACTGGAAT ACAAAGGGAA AAAGATCAGA ATCGTAAAGG GAGACATCAC AAGAGAAGAA GCGGACGCCA TAGTGAACGC GGCGAACGAA TATCTGAAAC ACGGAGGAGG AGTAGCGGGA GCGATCGTGA GAGCAGGTGG AAGCGTTATT CAGGAGGAAA GCGACAGGAT CGTTCAGGAG CGTGGAAGAA TTCCGACAGG CGAAGCGGTG GTAACCGGCG CTGGAAAGCT GAAGGCAAAA TACATGATTC ACGCTGTGGG ACCCGTTTGG AGAGGAGGCA GTCATGGAGA GGACGAACTC CTCTACAAAG CAGTTTACAA CGCACTCCTT CGAGCTCACG AACTGAAATT GAAAAGCATC TCAATGCCTG CCATCAGCAC AGGAATCTTC GGATTTCCGA AAGAAAGAGC GGTGGGAATC TTTTCAAAGG CAATAAAAGA TTTCATCGAT CAACATCCGG ATACCGCTCT GGAAGAAATC CGCATATGCA ATATAGACGA GGAAACAACG AAAATTTTCG AAGAAAAGTT CAGCGTTTGA
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Protein sequence | MSISEKPLNE LLRPKDFEDF VGQDHIFGDK GILRRTLKTG NMFSSILYGP PGSGKTSVFS LLKRYFNGEV VYLSSTVHGV SEIKNVLKRG EQLRKYGKKL LLFLDEIHRL NKNQQMVLVS HVERGDIVLV ATTTENPSFA IVPALLSRCR ILYFKKLSDE DLMKILKKAT EVLNIDLEET VEKAIVRYSE GDARKLLNTL EIVHQAFKNK RATLEDLETL LGNVSGYTKE SHYDFASAFI KSMRGSDPNA AVYYLVKMIE MGEDPRFIAR RMIIFASEDV GLADPNALHI AVSTSIAVEH VGLPECLMNL VECAIYLSLA PKSNSVYLAM KKAQELLVED VPLFLRNPVT EEMKKRGYGE GYLYPHDFGG FVKTNYLPEK LKGEVIFQPK RVGFEEELFE RLKRLWPEKY GGESMAEVRK ELEYKGKKIR IVKGDITREE ADAIVNAANE YLKHGGGVAG AIVRAGGSVI QEESDRIVQE RGRIPTGEAV VTGAGKLKAK YMIHAVGPVW RGGSHGEDEL LYKAVYNALL RAHELKLKSI SMPAISTGIF GFPKERAVGI FSKAIKDFID QHPDTALEEI RICNIDEETT KIFEEKFSV
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