Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0428 |
Symbol | |
ID | 6091833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 416514 |
End bp | 417443 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642487606 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_001738467 |
Protein GI | 170288229 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1087] UDP-glucose 4-epimerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000231351 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGTTC TGGTAACAGG CGGAGCGGGC TTCATAGGAT CCCACGTGGT GGACAAACTG ATAGAAAACG GATACGGCGT CATTGTGGTG GACAATCTAT CCTCTGGAAA GGTCGAAAAC CTCAACAGAA ACGCGCTGTT TTATGAACAG AGTATAGAGG ACGAAGAAAT GATGGAGCGG ATCTTCTCTC TGCACAGACC CGAGTATGTC TTTCACCTCG CCGCTCAGGC TAGTGTCGCC ATCTCCGTTA GGGAACCTGT CAGAGACGCG GAAACGAACA TCATTGGATC TCTTGTGCTT CTTGAAAAAT CCATCAAGCA CGGTGTTAAA AAATTCATTT TTTCATCCAC CGGTGGGGCT ATATACGGAG AGAATGTGAA GGTCTTTCCA ACACCAGAGA CGGAGACACC TCATCCGATA TCACCTTACG GTATTGCGAA GTACAGCATC GAGATGTACC TGGAATTCTT CGCAAGAGAG TACGGGCTGA AGTACACAGT CCTCAGATAC GCCAACGTTT ACGGGCCAAG ACAGGATCCG TACGGTGAAG CGGGCGTGGT GGCCATCTTC ACTGAAAGGA TGCTCAGGGG AGAGGAAGTT CACATATTCG GTGATGGAGA GTACGTCAGA GACTACGTTT ACGTTGATGA CGTAGTCAGA GCGAATCTTC TCGCCATGGA GAAAGGCGAC AACGAAGTCT TCAACATAGG AACGGGAAGG GGCACGACCG TGAACCAGCT CTTCAAACTG CTGAAAGAGA TCACTGGCTA CGATAAAGAG CCCGTCTATA AACCACCGCG TAAGGGCGAC GTGAGAAAGA GCATTCTCGA TTACACGAAG GCGAAGGAAA AACTCGGCTG GGAACCCAAA GTTTCCCTTG AGGAGGGATT GAAGCTCACC GTTGAGTATT TCAGAAAAAC CCTTGAATGA
|
Protein sequence | MNVLVTGGAG FIGSHVVDKL IENGYGVIVV DNLSSGKVEN LNRNALFYEQ SIEDEEMMER IFSLHRPEYV FHLAAQASVA ISVREPVRDA ETNIIGSLVL LEKSIKHGVK KFIFSSTGGA IYGENVKVFP TPETETPHPI SPYGIAKYSI EMYLEFFARE YGLKYTVLRY ANVYGPRQDP YGEAGVVAIF TERMLRGEEV HIFGDGEYVR DYVYVDDVVR ANLLAMEKGD NEVFNIGTGR GTTVNQLFKL LKEITGYDKE PVYKPPRKGD VRKSILDYTK AKEKLGWEPK VSLEEGLKLT VEYFRKTLE
|
| |