Gene TRQ2_0428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_0428 
Symbol 
ID6091833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp416514 
End bp417443 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content49% 
IMG OID642487606 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001738467 
Protein GI170288229 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000231351 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTTC TGGTAACAGG CGGAGCGGGC TTCATAGGAT CCCACGTGGT GGACAAACTG 
ATAGAAAACG GATACGGCGT CATTGTGGTG GACAATCTAT CCTCTGGAAA GGTCGAAAAC
CTCAACAGAA ACGCGCTGTT TTATGAACAG AGTATAGAGG ACGAAGAAAT GATGGAGCGG
ATCTTCTCTC TGCACAGACC CGAGTATGTC TTTCACCTCG CCGCTCAGGC TAGTGTCGCC
ATCTCCGTTA GGGAACCTGT CAGAGACGCG GAAACGAACA TCATTGGATC TCTTGTGCTT
CTTGAAAAAT CCATCAAGCA CGGTGTTAAA AAATTCATTT TTTCATCCAC CGGTGGGGCT
ATATACGGAG AGAATGTGAA GGTCTTTCCA ACACCAGAGA CGGAGACACC TCATCCGATA
TCACCTTACG GTATTGCGAA GTACAGCATC GAGATGTACC TGGAATTCTT CGCAAGAGAG
TACGGGCTGA AGTACACAGT CCTCAGATAC GCCAACGTTT ACGGGCCAAG ACAGGATCCG
TACGGTGAAG CGGGCGTGGT GGCCATCTTC ACTGAAAGGA TGCTCAGGGG AGAGGAAGTT
CACATATTCG GTGATGGAGA GTACGTCAGA GACTACGTTT ACGTTGATGA CGTAGTCAGA
GCGAATCTTC TCGCCATGGA GAAAGGCGAC AACGAAGTCT TCAACATAGG AACGGGAAGG
GGCACGACCG TGAACCAGCT CTTCAAACTG CTGAAAGAGA TCACTGGCTA CGATAAAGAG
CCCGTCTATA AACCACCGCG TAAGGGCGAC GTGAGAAAGA GCATTCTCGA TTACACGAAG
GCGAAGGAAA AACTCGGCTG GGAACCCAAA GTTTCCCTTG AGGAGGGATT GAAGCTCACC
GTTGAGTATT TCAGAAAAAC CCTTGAATGA
 
Protein sequence
MNVLVTGGAG FIGSHVVDKL IENGYGVIVV DNLSSGKVEN LNRNALFYEQ SIEDEEMMER 
IFSLHRPEYV FHLAAQASVA ISVREPVRDA ETNIIGSLVL LEKSIKHGVK KFIFSSTGGA
IYGENVKVFP TPETETPHPI SPYGIAKYSI EMYLEFFARE YGLKYTVLRY ANVYGPRQDP
YGEAGVVAIF TERMLRGEEV HIFGDGEYVR DYVYVDDVVR ANLLAMEKGD NEVFNIGTGR
GTTVNQLFKL LKEITGYDKE PVYKPPRKGD VRKSILDYTK AKEKLGWEPK VSLEEGLKLT
VEYFRKTLE