| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0417 |
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| Symbol | mnmA |
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| ID | 6091822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga sp. RQ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010483 |
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| Strand | + |
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| Start bp | 406795 |
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| End bp | 407871 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642487595 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001738456 |
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| Protein GI | 170288218 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000611049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAGTAG GTGTGGCTCT GAGTGGCGGC GTGGACAGTG CTGTTGCCCT GTATCTTCTT
CTCAAAGAAG GACACGAGGT GAAGGCATTC CACATGAAAA CAAAAGAAGA CGAGTTCTTC
CTGAAAAAAG AGATAAAAAA GAAGGTCTGT TGCAGTCCCT CTGACACAGC CGATGCGATA
AGGATCGCTC GCTCTCTGGG CGTGGAAATA GAGATCGTCG ATGTGAGAGA AGTCTTCAGA
GAAAAGGTCA TAGAACCTTT CAAGAGGGAT CTGCTCAGAG GACTCACTCC CAATCCCTGC
GTCCATTGCA ACAGGTATGT GAAGTTTGGA TACTTCATGG ACTACGTACT TTCGCAAGGA
TTCGACGCTT TCGCAAGCGG GCATTATGCG CGTGTTGAGT TCAGTGGCAA ATACGGAAAA
AAGGTAATAA AGAAGGGCGT GGACGGAAAA AAAGATCAAT CGTATTTCCT TGCCAGGATA
GAACCCTGGA GGATAGAGAA ACTTCTCTTT CCAAACGGCA TCTACACGAA GGAAGAGATC
AGGAGAATCG CAGAAGAGGC CGGTATACAC GTGGCAAAGA AACAGGAAAG CCAGGACGTG
TGTTTCATAC CGGATGGAAG CATCGAAAAC TTTCTGAAAG ATGAAGGAAT AACCCTTTCA
GAAGGAAAGG TGATCACAGA AAAAGGCGAA GTCGTCGGAC ACCACAGAGG TTATCCACTC
TACACGGTCG GCCAGAGGAA AGGACTGAAG ATAGAAAAGT TCGGTGAAAG ACTTTACGTG
AGAGAGAAGA TACCAGAAAG CAACGTCGTT GTGGTCTCTG GTCTGGAAGA TGTTTTCTTC
TCCGGTTTGA TCGCAGAAGA TCCTGTCTGG CATGTTGAAG TGCCGGAAGA GTTCAGATGC
GTCTGCAGGG TGAGGAAAAA ATCGGAAGAA GCCCCCGCAG TTGTCAGGGT AAGAGATAAC
GAAGTGGAGG TCAGGTTCGA GAAGAAGGTC TTTGCCGTCA CACCGGGCCA GATCGCTGCC
TTCTACGACG AAGACACACT CCTTGGAGGA GCGATCATAA AGGAGGGAAT CCGATGA
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| Protein sequence | MKVGVALSGG VDSAVALYLL LKEGHEVKAF HMKTKEDEFF LKKEIKKKVC CSPSDTADAI
RIARSLGVEI EIVDVREVFR EKVIEPFKRD LLRGLTPNPC VHCNRYVKFG YFMDYVLSQG
FDAFASGHYA RVEFSGKYGK KVIKKGVDGK KDQSYFLARI EPWRIEKLLF PNGIYTKEEI
RRIAEEAGIH VAKKQESQDV CFIPDGSIEN FLKDEGITLS EGKVITEKGE VVGHHRGYPL
YTVGQRKGLK IEKFGERLYV REKIPESNVV VVSGLEDVFF SGLIAEDPVW HVEVPEEFRC
VCRVRKKSEE APAVVRVRDN EVEVRFEKKV FAVTPGQIAA FYDEDTLLGG AIIKEGIR
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