Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0415 |
Symbol | hslU |
ID | 6091820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 404780 |
End bp | 406171 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642487593 |
Product | ATP-dependent protease ATP-binding subunit HslU |
Protein accession | YP_001738454 |
Protein GI | 170288216 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00145685 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAGTT TCGATGAAAT GACTCCGAAG GAAATCGTTC AAGAACTCGA TAAATACATA GTTGGTCAGT ACGAAGCGAA AAAGGCCGTG GCGATAGCAG TTCGAAACAG AATCAGAAGA CAGAAGCTTC CAGAAGAATG GAGAAAAGAA GTGCTTCCCA AGAACATCCT GATGATCGGA CCCACGGGTG TGGGAAAGAC AGAGATCGCC CGGAGACTGG CTCAGCTTTC CGGATCCCCG TTCTTGAAAG TCGAAGCGAC GAGGTTTACG GAAGTGGGAT ACGTGGGAAA GAACGTGGAC TCGATGATAA GGGATCTGGT TGAGATCAGT GTCAACATGG TGAAGCAGGA AAAGATAAAA GAAGTGGAAA GACAGGCAGA AGAACTGGTT GAAGAGCGAA TTCTCGATGC TCTCGTGCCC GAATCGAAAG CCGTGCCGGT TGTCACGAAT CCCTTCATAA ACCTCATAAC CGGTGGACAG CAACAGCAGT ACACGCCGGA AGACAGGAGA AGGTTCAGAG CGAAAAGGGA AGAAATGAGG GAGAAACTGA GAAAGGGAGA GCTGGAAAAC GAAGAGATCG AAATAGAACT CGAAGAAACG GTTTCTCCGT TCATGGGAAT CTTTGGACCG GGTATGGAAG ACCTCGGGAT AGAGATCACG AATATGTTCA GTGGGATGCT TCCAAAGCAG AAGAAAAAGA GAAAGATGAA AGTCTCTGAA GCGAGGAAGG TTCTGCTGCC TTTGGAAGCG GAAAAACTCA TAGACATGGA CAAGGTGGTT CAGGAAGCAC TCGACAGAGC TCAGAACAGG GGAATCATCT TCATAGATGA AATAGACAAG ATCGCCGGGA AAGAGAGTGC GGTGGGACCA GATGTCTCCA GACAAGGTGT CCAGAGAGAC CTTCTCCCCA TCGTCGAAGG TACCACGATC ATGACCAAGT ACGGACCGGT GAGAACGGAT TACATTCTCT TCATAGCGGC TGGAGCATTT CACGTTTCGC GACCATCGGA TCTCATCCCG GAGCTTCAGG GACGTTTCCC GATACGTGTG GAACTGTCAC CTCTCACCGA GGAGGATTTC GTGAGGATAC TGAAAGAACC AGAGAACGCC ATCATAAAAC AGTACCAGGC ACTCCTTTCG ACGGAAGGCG TGGAACTCGT CTTCACCGAG GATGGAATCA GAGAAATGGC TCGAATAGCG TACCAGTTGA ATCAAAGGCT CGAAAACATC GGAGCCAGAA GGCTCTACAC GGTCGCGGAA AAGGTCCTCG AGGAGATCTC TTTCGAAGCA CCGGATATTC CGGAAAAGAG GATCGTTGTG GATGCCGAAT ACGTGAGAAG GAGGCTCGAA AGGATCGTTC AGGACGAGGA CCTTAGCGCG TACATACTGT GA
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Protein sequence | MKSFDEMTPK EIVQELDKYI VGQYEAKKAV AIAVRNRIRR QKLPEEWRKE VLPKNILMIG PTGVGKTEIA RRLAQLSGSP FLKVEATRFT EVGYVGKNVD SMIRDLVEIS VNMVKQEKIK EVERQAEELV EERILDALVP ESKAVPVVTN PFINLITGGQ QQQYTPEDRR RFRAKREEMR EKLRKGELEN EEIEIELEET VSPFMGIFGP GMEDLGIEIT NMFSGMLPKQ KKKRKMKVSE ARKVLLPLEA EKLIDMDKVV QEALDRAQNR GIIFIDEIDK IAGKESAVGP DVSRQGVQRD LLPIVEGTTI MTKYGPVRTD YILFIAAGAF HVSRPSDLIP ELQGRFPIRV ELSPLTEEDF VRILKEPENA IIKQYQALLS TEGVELVFTE DGIREMARIA YQLNQRLENI GARRLYTVAE KVLEEISFEA PDIPEKRIVV DAEYVRRRLE RIVQDEDLSA YIL
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