Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0386 |
Symbol | |
ID | 6091791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 374006 |
End bp | 375670 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642487564 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_001738425 |
Protein GI | 170288187 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGGAGTG ATGTGATAAA AAAGGGCCTC GAAAGGGCTC CTCATAGATC ACTTTTGAAG GCACTCGGAA TAACGGACGA CGAAATGCGA AGGCCTTTCA TCGGCATAGT GTCCTCGTGG AACGAGATCA TTCCCGGCCA TGTCCACCTT GACAAGGTTG TCGAGGCGGT GAAAGCCGGT GTGAGAATGG CCGGAGGAGT TCCTTTCGTC TTTCCAACGA TCGGGATCTG TGACGGAATA GCCATGGATC ACAGGGGAAT GAAGTTTTCC TTGCCCTCGA GGGAACTCAT AGCGGACTCC ATAGAGATCG TTGCAAGCGG TTTCCCCTTC GATGGTTTGG TCTTCGTCCC CAACTGCGAC AAGATCACAC CCGGCATGAT GATGGCCATG GGAAGATTGA ACATCCCGTC CGTTCTGATA TCCGGCGGTC CCATGCTCGC AGGTCGCTAC AACGGCAGAG ACATCGATCT CATCACCGTC TTCGAAGCGG TTGGTGGATA CAAAGTGGGA AAAGTCGATG AAGAAACGCT CAAAGCGATA GAAGATCTCG CGTGCCCGGG TGCCGGTTCG TGTGCTGGAT TGTTCACCGC GAACACGATG AACTCTCTGG CGGAAGCTCT CGGAATCGCA CCGAGGGGGA ATGGGACTGT ACCGGCCGTA CATGCGAAGA GGTTGAGAAT GGCGAAAGAA GCGGGAATAC TCGTTGTGGA ACTCGTGAAA AGAGATATAA AACCAAGAGA TATCGTCACT CTGGACTCTT TCATGAACGC TGTCATGGTG GATCTTGCAA CGGGAGGATC CACGAACACA GTTCTGCATT TGAAGGCGAT AGCCGAGAGT TTTGGAATAG ATTTCGATAT AAAGCTCTTT GACGAACTCA GCAGGAAGAT TCCTCACATC TGCAACATCT CTCCCGTTGG TCCGTACCAC ATCCAGGATC TCGACGATGC TGGTGGTATC TACGCTGTGA TGAAACGTCT CCAGGAAAAT GGTCTTTTGA AGGAAGACGT CATGACCATC TATTTGAGAA AGATTGGAGA TCTCGTCAGA GAAGCTAAGA TCCTGAATGA AGATGTGATC AGGCCCTTCG ATAATCCGTA CCACAAAGAG GGCGGGCTCG GTATCCTCTT CGGGAACCTC GCTCCGGAAG GAGCGGTTGC CAAACTCTCC GGTGTTCCCG AGAAGATGAT GCACCACGTT GGCCCGGCCG TCGTCTTTGA AGACGGAGAA GAGGCGACAA AAGCCATTCT ATCTGGAAAG ATCAAAAAAG GAGACGTGGT TGTGATTCGC TACGAAGGAC CGAAGGGTGG TCCCGGGATG AGGGAGATGC TCTCACCCAC CTCCGCTATC GTGGGGATGG GCCTTGCGGA GGACGTGGCT CTCATCACAG ACGGTAGGTT CTCGGGTGGA TCGCACGGTG CCGTGATAGG TCACGTTTCT CCAGAAGCGG CAGAAGGCGG TCCTATAGGT ATCGTGAAAG ACGGGGACCT CATCGAGATA GATTTTGAAA AGAGAACCCT GAATCTCTTG ATCTCAGACG AAGAGTTCGA AAGAAGAATG AAAGAGTTCA CGCCTCTGGT GAAAGAAGTG GACAGCGATT ACCTGAGAAG GTACGCGTTC TTCGTGCAGT CGGCGAGCAA GGGGGCAACC TTCAGGAAGC CCTGA
|
Protein sequence | MRSDVIKKGL ERAPHRSLLK ALGITDDEMR RPFIGIVSSW NEIIPGHVHL DKVVEAVKAG VRMAGGVPFV FPTIGICDGI AMDHRGMKFS LPSRELIADS IEIVASGFPF DGLVFVPNCD KITPGMMMAM GRLNIPSVLI SGGPMLAGRY NGRDIDLITV FEAVGGYKVG KVDEETLKAI EDLACPGAGS CAGLFTANTM NSLAEALGIA PRGNGTVPAV HAKRLRMAKE AGILVVELVK RDIKPRDIVT LDSFMNAVMV DLATGGSTNT VLHLKAIAES FGIDFDIKLF DELSRKIPHI CNISPVGPYH IQDLDDAGGI YAVMKRLQEN GLLKEDVMTI YLRKIGDLVR EAKILNEDVI RPFDNPYHKE GGLGILFGNL APEGAVAKLS GVPEKMMHHV GPAVVFEDGE EATKAILSGK IKKGDVVVIR YEGPKGGPGM REMLSPTSAI VGMGLAEDVA LITDGRFSGG SHGAVIGHVS PEAAEGGPIG IVKDGDLIEI DFEKRTLNLL ISDEEFERRM KEFTPLVKEV DSDYLRRYAF FVQSASKGAT FRKP
|
| |