| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0369 |
|---|
| Symbol | |
|---|
| ID | 6091774 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | + |
|---|
| Start bp | 356528 |
|---|
| End bp | 356941 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642487547 |
|---|
| Product | BadM/Rrf2 family transcriptional regulator |
|---|
| Protein accession | YP_001738408 |
|---|
| Protein GI | 170288170 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00170457 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCACGA TGCGTAGTGA ATACGCGCTC AGGCTCATGA TCGTGATGGC AAAAGAGTAC
GGAAACTACC TTTCGATGAC AGAAATACTG GAGAAAGCGA AACAGTCAGT TCCAAGGGAA
TTCGCAGAAA AAATCCTGTA CACCCTGAAA AAAGCCGGGC TGGTGAAAAC AAGAAGAGGG
AAAAGCGGTG GATACATGCT GTCGCGTCCG CCAAAAGAAA TAAAGGTTTC TGAGATCGTG
TTTCTTCTGG ACAGGAAGTC GAAGGTTTTC TTCGACATGC CTGGCTGTCC GGACGAGCTG
GACTGCGTTA TCAGGGCCCT GTGGAAAAGG GTAGAGAACG AAATAGAGAA GATTTTAAGC
GGTGTGACTC TCGAAGATTT GGTGAGAGAA CAAGAAGAGA AAATGAAACA ATGA
|
|---|
| Protein sequence | MFTMRSEYAL RLMIVMAKEY GNYLSMTEIL EKAKQSVPRE FAEKILYTLK KAGLVKTRRG
KSGGYMLSRP PKEIKVSEIV FLLDRKSKVF FDMPGCPDEL DCVIRALWKR VENEIEKILS
GVTLEDLVRE QEEKMKQ
|
|---|
| |