| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0364 |
|---|
| Symbol | |
|---|
| ID | 6091769 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | - |
|---|
| Start bp | 350608 |
|---|
| End bp | 351759 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642487542 |
|---|
| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
|---|
| Protein accession | YP_001738403 |
|---|
| Protein GI | 170288165 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCCGT TATCAAGGCC CGATATAAAC GAGCAGGACA TCGAAAGGGT AGTGGAAGTT
TTAAAAAGCG GAAGGCTCAG TCTCGGTGAA TACACGAAGC GTTTTGGAGA GATGGTGGCC
GAATACACGG GTGCCAGATT CGGCTGGGCG GTGAGCAGTG GAACAGCTGC GCTCCATCTC
ATCCTGGAGA GTCTCGATAT CGACGAGGGA GATCTGATCC TTGTGCCTTC CTTCACCTTC
ATCGCTTCTG TTAACGTAAT CCTAATGAAA AGGGCAGTCC CTGTTTTTGT GGATGTGGAT
GAGAGAACTC TGAACGTTTC TCCAGAAACA CTGGAGGAGG CGGTGAAAAG GTGCCTCAAA
GGATTCAAAC AGGGAAACAT TGAGATAAAA GGAAAACCCC GTCTCTTCAT GGCCGTTGAT
GTTTTTGGGC ATCCCCTCGA CTGGGACGGG ATTCTCGACG TCTGTCAGAG GTACGGCATC
GCGGTGGTGG AAGACTCCTG TGAAGCTCTT GGATCCGAGT ACAAAGGAAG AAAGGTGGGC
ACCTTTGGAG TGGCCGGCGC TTTCGCATTC TACCCGAACA AACAGATCAC CACAGGAGAG
GGCGGTGTTG TTGTGACGAA CGATGAAAAG ATACACACCG CTGTGAAGAG CATGAGCAAC
CAGGGAAGAG GTGAAGGAGA CGAATGGCTC TACCATGTGC GTTTCGGTTA CAACTACAGA
ATCGACGAGA TGTCGGCCGC GCTTGGATGC TCTCAAATGG AAAGAATCGA TGAGATCGTA
GAAAAACGCG CAGAAGCGGC GGAGAGATAT TCAAAGATGT TGAAGGAGTT TTCCTGGGTA
AAGGTGCCCG TCGTGGAAGA TTACGTCACT AAGATGAGCT GGTTCGTCTA CGTCGTGAGA
CTGGAAGGTC CAGATAGAAA CCGTGTGATG AGGTACATGG AAGAAAAGGG AGTCCAGGTT
AGAAACTACT TTTATCCCGT CCACTTTCAA CCATTCTACG AAAAACTCTT CGGCAGCATG
AAAGGACTGC TTCCCGTGAC GGAGAGGGAA TCTGAGAAAA CGCTCGCCAT TCCGTTCTTT
ACGAGCATCA CAGAAAGTGA ACAGAAGACG GTGGTGGAGA TCCTCAGAGA GGCGGTGGAG
AGGGTTGGTT AG
|
|---|
| Protein sequence | MIPLSRPDIN EQDIERVVEV LKSGRLSLGE YTKRFGEMVA EYTGARFGWA VSSGTAALHL
ILESLDIDEG DLILVPSFTF IASVNVILMK RAVPVFVDVD ERTLNVSPET LEEAVKRCLK
GFKQGNIEIK GKPRLFMAVD VFGHPLDWDG ILDVCQRYGI AVVEDSCEAL GSEYKGRKVG
TFGVAGAFAF YPNKQITTGE GGVVVTNDEK IHTAVKSMSN QGRGEGDEWL YHVRFGYNYR
IDEMSAALGC SQMERIDEIV EKRAEAAERY SKMLKEFSWV KVPVVEDYVT KMSWFVYVVR
LEGPDRNRVM RYMEEKGVQV RNYFYPVHFQ PFYEKLFGSM KGLLPVTERE SEKTLAIPFF
TSITESEQKT VVEILREAVE RVG
|
|---|
| |