Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0360 |
Symbol | polC |
ID | 6091765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 343500 |
End bp | 347603 |
Gene Length | 4104 bp |
Protein Length | 1367 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642487538 |
Product | DNA polymerase III PolC |
Protein accession | YP_001738399 |
Protein GI | 170288161 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family [TIGR01405] DNA polymerase III, alpha chain, Gram-positive type |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGAAAA TTGAAAATCT GAAATGGAAA GATGTAACAT TCGAGAGTAT AGAGATAGAT CCCGACGCGG GTGTGGTTCT CGTTTCTGTG GAAAAATTTT CCTCCGAAGT AGAGAATCTT GTTAGCTTAC TCGAAAAGGA AACGAGGTTT CGAGTCATCG TGAACGGCGC TCAAAAAAGT AACGGGGATC TAAAGGGAAA GATACTTTCT CTTCTCAACG GTAACGTCCC CTACATAAAG GATGTTGTTT TCGAAGGAAA CAGACTGATT CTGAAAGTGC TTGGAGATTT CGCACGGGAC AGGATCGCCT CGAAACTCAG AAGCACGAAA AAACAGCTCG ATGAATTACT GCCTCCCGGA ACGGAGATCA TGTTTGAGGT CGTGGAGCCT CCGGAAGATC TTTTGAAAAA GGAAGTACCA CAACCAGAAA AGAGAGAAGA ACCGAAGGGT GAAGAATTGA AGATCGAGGA TGAAAACCAC ATCTTTGGAC AGAAACCCAG AAAGATCGTC TTCACCCCCT CAAAAATCTT TGAGTACAAC AAAAAGACAT CGGTGAAGGG CAAGGTCTTC AAAATAGAGA AGATCGAGGG GAAAAAAACG GTCCTTCTGA TTTACCTAAC GGACGGAGAG GATTCTCTGA TCTGCAAGGT CTTCAACGAC GTTGAAAAGG TCGAAGGAAA GATATCGTTG GGAGACGTCA TCGTTGCCAC AGGAGACCTC CTTCTCGAAA ACGGAGAGCC CACCCTTTAC GTGAAGGGAA TCACAAAACT TCCCGAAGCG AAAAGGATGG ACAACTCTCC AGTCAAGAGG GTGGAGCTCC ACGCCCACAC TAAGTTCAGC GATCAAGACG CGATAACGGA TGTGAACGAA TATGTGAAAC GAGCCAAGGA ATGGGGCTTC CCCGCGGTAG CTCTCACGGA TCATGGGAAC GTTCAGGCCA TACCTTACTT CTACGACGCA GCGAAAGAAG CTGGAATAAA GCCCATCTTC GGTATCGAAG CGTACTTAGT GAGCGACGTG GAGCCCGTAA TAAGGAACCT CTCCTACGAT TCATCGTTCG AAAATGCCAC ATTCGTCGTC CTCGACTTCG AGACAACGGG CCTCGACCCT CAGGTGGACG AGATCATCGA GATAGGAGCG GTGAAGATAC AGGACGGCCA GATAGTGGAC GAGTACCACA CTCTCATAAA GCCTTCCAGG GAGATCTCAA GAAGAAGTTC GGAGATCACC GGAATCACTC AAGAGATGCT GGAAAACAAG AGAAGCATCG AGGAAGTTCT ACCGGAATTC CTCGGTTTTC TGGAGAATTC CATCATCGTT GCCCACAACG CCAACTTCGA CTACAGATTT CTGAGGCTGT GGATCAAAAA AGTGATGGGG TTGGACTGGG AAAGACCCTA CATAGATACG CTCGCCCTCG CAAAGTCCCT TCTAAAAATG AGAAGCTACT CTCTGGATTC CGTTGTGGAA AAGCTCGGAT TGGGTCCGTT CCGTCACCAC AGGGCCCTGG ATGACGCGAG GGTCACCGCT CAGGTTTTCC TCAGGTTCGT TGAGATGATG AAGAAGATCG GGATCACGAA GCTTTCAGAA ATTGAGAATT TGAAGGATAC GATAGACTAC ACCGCGTTGA AACCCTTCCA CTGTACGATC CTCGTTCAGA ACAAAAAGGG ATTGAAAAAC CTCTACAAAC TGGTTTCTGA TTCCTATATA AAGTACTTCT ACGGTGTTCC GAGGATCCTC AAAAGTGCGC TCATCGAAAA CAGAGAAGGA CTGCTTGTGG GAAGCGCGTG TATCTCCGGT GAGCTCGGAC GTGCCGCCCT CGAAGGGGCG AGTGATTCAG AACTCGAGGA GATCGCAAAG TTCTACGACT ACATAGAAGT CATGCCGCTC GACGTTATAG CCGAAGACGA AGAGGACTTA GACAGAGAAA GGCTGAAAGA AGTGTACCGA AGACTCTACA GAATAGCGAA AAAGCTGAAC AAATTCGTTG TCATGACCGG TGATGTTCAT TTCCTCGATC CCGAAGATGC CAGGGGCAGA GCTGCACTTC TGGCACCTCA GGGAAACAGA AACTTCGAGA ATCAGCCCGC ACTCTACCTC AGAACGACCG AAGAAATGCT CGAAAAGGCG ATGGAGATAT TCGAAGATGA AGAGATCGCG AGGGAAGTCG TGATAGAGAA TCCCAACAGA ATAGCCGATA TGATCGAGGA AGTGCAGCCG CTCGAGAAAA AACTTCACCC GCCGATCATA GAGAACGCCG ATGAAATAGT GAGAAACCTC ACCATGAAGC GGGCGTACGA GATCTACGGT GATCCGCTTC CCGAAATCGT CCAGAAGCGT GTGGAAAAGG AACTGAACGC CATCATAAAT CATGGATACG CCGTTCTCTA TCTCATCGCT CAGGAGCTCG TTCAGAAATC TATGAGCGAT GGTTACGTGG TTGGATCCAG AGGATCCGTC GGGTCTTCAC TCGTGGCCAA TCTCCTCGGA ATAACAGAGG TGAATCCCCT ACCACCACAT TACAGGTGTC CGGAGTGCAA ATACTTCGAG GTTGTCGAAG ACGACAGATA CGGAGCGGGT TACGACCTTC CCGATAAAAA ATGCCCAGTG TGCGGTGCCC CTCTCAAAAA AGACGGTCAC GACATACCGT TTGAAACGTT CATGGGGTTT GAAGGTGACA AGGTCCCCGA CATCGATCTT AACTTCTCAG GAGAGTATCA GGAACGTGCT CATCGCTTCG TGGAAGAACT CTTCGGTAAA GACCACGTCT ACAGGGCGGG AACCATAAAC ACCATCGCGG AAAAAAGCGC GGTGGGTTAC GTGAGAAGCT ACGAAGAGAA AACCGGAAAG AAGCTCAGAA AGGCGGAGAT GGAAAGACTC GTTTCCATGA TCACGGGAGT GAAGAGAACA ACGGGCCAGC ACCCAGGAGG ACTCATGATC ATACCGAAAG ACAAAGAAGT CTACGATTTC ACTCCCATAC AGTATCCAGC CAACGATAGA AACGCGGGAG TGTTCACCAC ACACTTCGCG TACGAAACGA TCCACGATGA CCTGGTGAAG ATAGATGCGC TCGGTCACGA TGATCCTACT TTCATCAAGA TGCTCAAGGA TCTCACCGGA ATCGATCCCA TGACGATTCC CATGGATGAC CCCGAGACGC TCGCCATATT CAGTTCTGTG AAGCCCCTTG GTGTGGATCC CGTTGAGCTG GAGAGCGACG TGGGAACTTA CGGAATCCCG GAGTTTGGAA CCGAGTTTGT GAGGGGAATG CTTGTTGAGA CGAGACCGAA GAGTTTCGCC GAGCTTGTGA GGATCTCAGG ACTGTCACAC GGTACGGACG TCTGGTTGAA CAACGCGCGC GACTGGATAA ACCTCGGCTA CGCCAAGCTC TCCGATGTTA TTTCGTGTAG GGACGACATC ATGAACTTCC TCATACACAA GGGAATGGAA CCTTCTCTTG CTTTCAAGAT CATGGAAAAC GTCAGGAAGG GAAAGGGTAT CACAGAAGAA ATGGAGAGTG AAATGAGAAA GTTGAAGGTT CCAGAGTGGT TCATCGAATC ATGCAAGAGG ATCAAATATC TCTTTCCGAA GGCTCACGCT GTGGCTTATG TGAGTATGGC CTTCAGAATC GCTTACTTCA AGGTTCACTA TCCTCTTCAG TTTTACGCGG CGTACTTCAC GATAAAAGGT GATCAGTTCG ATCCGGTTCT CGTACTCAGG GGAAAAGAAG CCATAAAGAG GCGCTTGAGA GAACTCAAAG CGATGCCTGC CAAAGACGCC CAGAAGAAAA ACGAAGTGAG TGTTCTGGAG GTTGCCCTGG AAATGATACT GAGAGGTTTT TCCTTCCTAC CGCCCGACAT CTTCAAATCC GACGCGAAGA AATTTCTGAT AGAAGGAAAC TCGCTGAGAA TTCCGTTCAA CAAACTTCCA GGACTGGGTG ACAGCGTTGC CGAGTCGATA ATCAGAGCCA GGGAAGAAAA GCCGTTCACT TCGGTGGAAG ATCTCATGAA GAGGACCAAG GTCAACAAAA ATCACATAGA GCTGATGAAA AGCCTGGGTG TTCTCGGGGA CCTTCCAGAG ACGGAACAGT TCACGCTTTT CTAA
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Protein sequence | MEKIENLKWK DVTFESIEID PDAGVVLVSV EKFSSEVENL VSLLEKETRF RVIVNGAQKS NGDLKGKILS LLNGNVPYIK DVVFEGNRLI LKVLGDFARD RIASKLRSTK KQLDELLPPG TEIMFEVVEP PEDLLKKEVP QPEKREEPKG EELKIEDENH IFGQKPRKIV FTPSKIFEYN KKTSVKGKVF KIEKIEGKKT VLLIYLTDGE DSLICKVFND VEKVEGKISL GDVIVATGDL LLENGEPTLY VKGITKLPEA KRMDNSPVKR VELHAHTKFS DQDAITDVNE YVKRAKEWGF PAVALTDHGN VQAIPYFYDA AKEAGIKPIF GIEAYLVSDV EPVIRNLSYD SSFENATFVV LDFETTGLDP QVDEIIEIGA VKIQDGQIVD EYHTLIKPSR EISRRSSEIT GITQEMLENK RSIEEVLPEF LGFLENSIIV AHNANFDYRF LRLWIKKVMG LDWERPYIDT LALAKSLLKM RSYSLDSVVE KLGLGPFRHH RALDDARVTA QVFLRFVEMM KKIGITKLSE IENLKDTIDY TALKPFHCTI LVQNKKGLKN LYKLVSDSYI KYFYGVPRIL KSALIENREG LLVGSACISG ELGRAALEGA SDSELEEIAK FYDYIEVMPL DVIAEDEEDL DRERLKEVYR RLYRIAKKLN KFVVMTGDVH FLDPEDARGR AALLAPQGNR NFENQPALYL RTTEEMLEKA MEIFEDEEIA REVVIENPNR IADMIEEVQP LEKKLHPPII ENADEIVRNL TMKRAYEIYG DPLPEIVQKR VEKELNAIIN HGYAVLYLIA QELVQKSMSD GYVVGSRGSV GSSLVANLLG ITEVNPLPPH YRCPECKYFE VVEDDRYGAG YDLPDKKCPV CGAPLKKDGH DIPFETFMGF EGDKVPDIDL NFSGEYQERA HRFVEELFGK DHVYRAGTIN TIAEKSAVGY VRSYEEKTGK KLRKAEMERL VSMITGVKRT TGQHPGGLMI IPKDKEVYDF TPIQYPANDR NAGVFTTHFA YETIHDDLVK IDALGHDDPT FIKMLKDLTG IDPMTIPMDD PETLAIFSSV KPLGVDPVEL ESDVGTYGIP EFGTEFVRGM LVETRPKSFA ELVRISGLSH GTDVWLNNAR DWINLGYAKL SDVISCRDDI MNFLIHKGME PSLAFKIMEN VRKGKGITEE MESEMRKLKV PEWFIESCKR IKYLFPKAHA VAYVSMAFRI AYFKVHYPLQ FYAAYFTIKG DQFDPVLVLR GKEAIKRRLR ELKAMPAKDA QKKNEVSVLE VALEMILRGF SFLPPDIFKS DAKKFLIEGN SLRIPFNKLP GLGDSVAESI IRAREEKPFT SVEDLMKRTK VNKNHIELMK SLGVLGDLPE TEQFTLF
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