| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0329 |
|---|
| Symbol | |
|---|
| ID | 6091733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | - |
|---|
| Start bp | 313169 |
|---|
| End bp | 314044 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642487506 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_001738368 |
|---|
| Protein GI | 170288130 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000424657 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAAATAA AGCGTCTCAC AGAGAGAGTG GCCTACGTTC CAAATCCGGT GAACATAGGT
GTTGTGTACA CAGAAAGCAC CGCCGTTCTC GTGGACAGCG GGCTCGATGA GAGCGTTCCA
AGAAAGATTT CTCGACTTCT GGAAAAGCCT CCTTTGTATC TCATAAACAC CCACTCTCAC
GCCGACCACT GCGGTGGGAA CGCCTTTCTG AAAAAGCGCT TCTCCACCCG CGTGTTCGCC
CCAAAGATGG AAAAAGAGAT CATAGAAAAC ACCGTCTTTG AGCCTTTCTA CCTGTACGGT
GCTCATCCTC CAGGTGAACT CAGAAACAAG TTTCTCATGG CAGACCCCTC CGCTGTCGAT
GAGGCGATCG AAGAGGGAAC CATCACGATT GAGAGCGTGG ATCTTGAGAT AGTACCTCTT
TCTGGACACT CACCGAACCA GATCGGAGTG GCTGTGGATG GTGTCCTTTT CTGTGCAGAC
GCCGTGTTTT CTGAAGAAAC ACTGAGAAAA CACAGAATAT TCGTCATCTA CAGCGTGGAG
AAGTTCCTTG AAACGCTCGA CTTTCTTGAA AAGACAAACT ACAGCTGCTA CGTTCCGTCT
CATGGTGAAG TGACTCGAAA CATCGGTGAA CTTGTGGAGA AAAACAGAAA GGCAGTGGAG
AACATCATCA ACGCCGTTCT GGAAGTCGCA GAAAGTCCTG TGAGCACAGA CGAACTGATG
AAACAGCTCT TCGATAGATT CAAAATCACC CTGGAGAATC TCACACAGTA TGTACTCTAC
AGATCCACCG TTCACGCGTA TCTGAGCTTT CTTCTGGACA GGAAAGAGAT AGAGAGGGAA
TTCAGAGACA ACGTTCTTGT GTGGAGGCAG TGCTGA
|
|---|
| Protein sequence | MEIKRLTERV AYVPNPVNIG VVYTESTAVL VDSGLDESVP RKISRLLEKP PLYLINTHSH
ADHCGGNAFL KKRFSTRVFA PKMEKEIIEN TVFEPFYLYG AHPPGELRNK FLMADPSAVD
EAIEEGTITI ESVDLEIVPL SGHSPNQIGV AVDGVLFCAD AVFSEETLRK HRIFVIYSVE
KFLETLDFLE KTNYSCYVPS HGEVTRNIGE LVEKNRKAVE NIINAVLEVA ESPVSTDELM
KQLFDRFKIT LENLTQYVLY RSTVHAYLSF LLDRKEIERE FRDNVLVWRQ C
|
|---|
| |