Gene TRQ2_0304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_0304 
Symbol 
ID6091708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp287580 
End bp288146 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content45% 
IMG OID642487483 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_001738345 
Protein GI170288107 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTCA TCGAAACAGA GCTCCCTGAA GTTCTGATCA TAGAACCTAG AGTCTTTGAA 
GATGAACGTG GCTGGTTCAT GGAGAGTTAT TCATACAGGG TTTTCAAGGA ACTGGGAATA
GATGTGGTTT TCGTCCAGGA CAACCATTCT TACTCGAAAA AGAAAGGCAC TTTGAGGGGT
ATTCATTTTC AGAACGACCC GATGGCACAG TCGAAACTTG TAAGGTGTAC AAGAGGCAGG
ATACTGGATG TAGCCGTCGA TCTCAGAAAG GGCTCTCCCA CATACAAAAA ATGGATAATG
TTGGAGCTCT CCGAGGAGAA CAAAAGAATG CTCTTCATTC CCAGGGGGTT TGGGCACGCT
TTTTTGACGC TCACTGACGA CGTGGAAGTT CAGTACAAAG TCGATCAGTA CTACTCAAAA
GAACACGACA GAAGCATCAG ATGGAACGAT CCAGATATAG GAATAGACTG GCCCATAAAA
GATCCGATCC TCTCGGAAAA AGACAGAAAC GCTCCTTTCC TGAAAGATAG CGATTGCAAT
TTCATCTACG TGGAGGAGAA AAGATGA
 
Protein sequence
MKVIETELPE VLIIEPRVFE DERGWFMESY SYRVFKELGI DVVFVQDNHS YSKKKGTLRG 
IHFQNDPMAQ SKLVRCTRGR ILDVAVDLRK GSPTYKKWIM LELSEENKRM LFIPRGFGHA
FLTLTDDVEV QYKVDQYYSK EHDRSIRWND PDIGIDWPIK DPILSEKDRN APFLKDSDCN
FIYVEEKR