Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0304 |
Symbol | |
ID | 6091708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 287580 |
End bp | 288146 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642487483 |
Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
Protein accession | YP_001738345 |
Protein GI | 170288107 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGTCA TCGAAACAGA GCTCCCTGAA GTTCTGATCA TAGAACCTAG AGTCTTTGAA GATGAACGTG GCTGGTTCAT GGAGAGTTAT TCATACAGGG TTTTCAAGGA ACTGGGAATA GATGTGGTTT TCGTCCAGGA CAACCATTCT TACTCGAAAA AGAAAGGCAC TTTGAGGGGT ATTCATTTTC AGAACGACCC GATGGCACAG TCGAAACTTG TAAGGTGTAC AAGAGGCAGG ATACTGGATG TAGCCGTCGA TCTCAGAAAG GGCTCTCCCA CATACAAAAA ATGGATAATG TTGGAGCTCT CCGAGGAGAA CAAAAGAATG CTCTTCATTC CCAGGGGGTT TGGGCACGCT TTTTTGACGC TCACTGACGA CGTGGAAGTT CAGTACAAAG TCGATCAGTA CTACTCAAAA GAACACGACA GAAGCATCAG ATGGAACGAT CCAGATATAG GAATAGACTG GCCCATAAAA GATCCGATCC TCTCGGAAAA AGACAGAAAC GCTCCTTTCC TGAAAGATAG CGATTGCAAT TTCATCTACG TGGAGGAGAA AAGATGA
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Protein sequence | MKVIETELPE VLIIEPRVFE DERGWFMESY SYRVFKELGI DVVFVQDNHS YSKKKGTLRG IHFQNDPMAQ SKLVRCTRGR ILDVAVDLRK GSPTYKKWIM LELSEENKRM LFIPRGFGHA FLTLTDDVEV QYKVDQYYSK EHDRSIRWND PDIGIDWPIK DPILSEKDRN APFLKDSDCN FIYVEEKR
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