Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0287 |
Symbol | |
ID | 6091691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 271275 |
End bp | 271892 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642487466 |
Product | HAD family hydrolase |
Protein accession | YP_001738328 |
Protein GI | 170288090 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.146619 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAGTTGG CTTTTGAAGT GAAGAACATC GTTTTCGATC TTGGAGGGGT TCTGATCGAC TGGAGACCCT GTGAATACCT GCTCGAGTCT TTCCCGGAAG AGGTGGCAAA AGTTCTCGAG AAAGAGATCT TCAAACACGA GGACTGGAAG TTGATGGACA GAGGTGTTCT TCCTGAGAAC AAGCTGTGGG AAAAGAAGAA GAGAGAGCTT TCTGGGTTCA GAGAGTACGT GGAAAGACTC GAAAGGGAAG TTCCAGAACT TTTGAGACCC ATTGAAGAGA ACGTGAAACT TCTTCCAGTG CTGAAAAAAA GCTTCAAGCT CTACGCTCTT TCCAACTATG GAAGGATCTA CTTCGAGATG GTGAGGGAAA GGTACGATTT CTTCGAACTC TTCGACGGCA TGGTGATTTC CTCTCACGTA GGCTACCTGA AACCTGAGAA AGAGATATAC CTCGAGCTGA TCAGAAGATA CAAGATTGTA CCTGAAGAGA GCCTCTTCAT AGACGACACA CCGGAAAATG TCAAGACTGC AAGAGAGATT GGTTTTCGAG CTGTTCGTCT TGAAAAGCCT TCGAAATTGA AGGAAATTCT GGTCAGAGAG CTAAAGATTG AACTGTGA
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Protein sequence | MKLAFEVKNI VFDLGGVLID WRPCEYLLES FPEEVAKVLE KEIFKHEDWK LMDRGVLPEN KLWEKKKREL SGFREYVERL EREVPELLRP IEENVKLLPV LKKSFKLYAL SNYGRIYFEM VRERYDFFEL FDGMVISSHV GYLKPEKEIY LELIRRYKIV PEESLFIDDT PENVKTAREI GFRAVRLEKP SKLKEILVRE LKIEL
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