Gene TRQ2_0287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_0287 
Symbol 
ID6091691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp271275 
End bp271892 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content45% 
IMG OID642487466 
ProductHAD family hydrolase 
Protein accessionYP_001738328 
Protein GI170288090 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.146619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGTTGG CTTTTGAAGT GAAGAACATC GTTTTCGATC TTGGAGGGGT TCTGATCGAC 
TGGAGACCCT GTGAATACCT GCTCGAGTCT TTCCCGGAAG AGGTGGCAAA AGTTCTCGAG
AAAGAGATCT TCAAACACGA GGACTGGAAG TTGATGGACA GAGGTGTTCT TCCTGAGAAC
AAGCTGTGGG AAAAGAAGAA GAGAGAGCTT TCTGGGTTCA GAGAGTACGT GGAAAGACTC
GAAAGGGAAG TTCCAGAACT TTTGAGACCC ATTGAAGAGA ACGTGAAACT TCTTCCAGTG
CTGAAAAAAA GCTTCAAGCT CTACGCTCTT TCCAACTATG GAAGGATCTA CTTCGAGATG
GTGAGGGAAA GGTACGATTT CTTCGAACTC TTCGACGGCA TGGTGATTTC CTCTCACGTA
GGCTACCTGA AACCTGAGAA AGAGATATAC CTCGAGCTGA TCAGAAGATA CAAGATTGTA
CCTGAAGAGA GCCTCTTCAT AGACGACACA CCGGAAAATG TCAAGACTGC AAGAGAGATT
GGTTTTCGAG CTGTTCGTCT TGAAAAGCCT TCGAAATTGA AGGAAATTCT GGTCAGAGAG
CTAAAGATTG AACTGTGA
 
Protein sequence
MKLAFEVKNI VFDLGGVLID WRPCEYLLES FPEEVAKVLE KEIFKHEDWK LMDRGVLPEN 
KLWEKKKREL SGFREYVERL EREVPELLRP IEENVKLLPV LKKSFKLYAL SNYGRIYFEM
VRERYDFFEL FDGMVISSHV GYLKPEKEIY LELIRRYKIV PEESLFIDDT PENVKTAREI
GFRAVRLEKP SKLKEILVRE LKIEL