| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0275 |
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| Symbol | |
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| ID | 6091679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga sp. RQ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010483 |
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| Strand | + |
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| Start bp | 259545 |
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| End bp | 260426 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642487455 |
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| Product | spermidine synthase |
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| Protein accession | YP_001738317 |
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| Protein GI | 170288079 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0154876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAGAAT TTGAAAGAGA TCTCCAGCCA AGACAGCACC TGTGGTACTT CGAGTACTAT
ACAGGAAACA ACGTGGGACT CTTCATGAAG ATAAACCGCA TGATCTACTC AGGACAGAGC
GACATTCAGA GGATAGATAT CTTCGAGAAT CCCGATCTTG GCGTGGTTTT TTCGCTCGAC
GGCATCACGA TGACCACGGA AAAGGACGAG TTCATGTACC ACGAAATGCT CGCACACGTT
CCCATGTTCC TCCATCCGAA CCCGAAGAAG GTGCTCATCA TCGGCGGTGG AGACGGCGGA
ACGCTCAGAG AAGTCCTGAA ACACGACAGC ATGGAGAAGG CGGTTCTCTG CGAAGTGGAC
GGACTCGTCA TAGAAGCCGC AAGGAAGTAT TTGAAGCAGA CTTCGTGCGG TTTCGACGAT
CCAAGGACAG AGATCGTGAT CGCAAACGGT GCCGAATACG TGAGGAAGTT CAAGAACGAG
TTCGATGTCA TCATCATAGA CTCCACGGAC CCGACGGCGG GCCAGGGTGG GCACCTCTTC
ACCGAAGAGT TCTACCAGGC CTGTTACGAT GCCCTCAAGG AAGACGGAGT CTTCTCCGCC
GAGACGGAAG ACCCGTTCTA CGACATCGGA TGGTTCAAGC TCGCTTACAA GAGGATCAGC
AAGGTCTTTC CTATCACGAA GGTTTACCTT GGATTCATGA CCACCTATCC CTCCGGCATG
TGGTCCTACA CCTTCGCCTC CAAGGGAATA GACCCGATAA AAGACTTCAA CCCCGAAAAG
GTGAAAAACT TCAACAAAGA GCTGAAGTAC TACAACGAAG AAGTTCACGT CGCGTCCTTC
GCCCTTCCGA ACTTCGTGAA GAAAGAACTC GGACTGATGT GA
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| Protein sequence | MKEFERDLQP RQHLWYFEYY TGNNVGLFMK INRMIYSGQS DIQRIDIFEN PDLGVVFSLD
GITMTTEKDE FMYHEMLAHV PMFLHPNPKK VLIIGGGDGG TLREVLKHDS MEKAVLCEVD
GLVIEAARKY LKQTSCGFDD PRTEIVIANG AEYVRKFKNE FDVIIIDSTD PTAGQGGHLF
TEEFYQACYD ALKEDGVFSA ETEDPFYDIG WFKLAYKRIS KVFPITKVYL GFMTTYPSGM
WSYTFASKGI DPIKDFNPEK VKNFNKELKY YNEEVHVASF ALPNFVKKEL GLM
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