Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0223 |
Symbol | |
ID | 6091627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 218388 |
End bp | 219065 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642487404 |
Product | ABC transporter related |
Protein accession | YP_001738266 |
Protein GI | 170288028 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATCGAGG TTCACAATCT GTGGAAGGAA TACAATGGGA AAGAGAAAGT AACAGCCTTG AAGGGTATAA ATCTAAGAAT AAACACGGGA GAGTTTGTTG TGATACTGGG CCCCTCCGGT TCTGGAAAGA CAACGCTTCT GAATTGTCTT TCTGGTGTGG ATCGCCCTAC AAGGGGAACT GTGATAATCC ATGGAACAGA CCTGTACACG CTCTCAGAAG AGGAAAGAAC GAGGTTCAGA GCGGAAAACA TGGGGTTTGT GTTCCAGTTC TTCAATCTCG TTCCTGTCCT CACCGCCATT GAAAATGTGG AACTACCTCT GCTCATTCTG GGTGTGAACA GAAAAGAGGC AAGAGAACGA GCCTTCGAAA TCTTGAGGAA AGTGGGGCTG GCTCACAAGT GCGACAGGTT CCCCGAAGAA CTCTCCGGAG GGGAAAAACA GCGTGTCGCC ATCGCGAGGG CCATCGTCCA CAATCCAAAA GTCATATGGG CAGATGAACC CACCGGTGCT CTGGACAACG AGACGGGGAG AATGATCATA GATCTTCTGA TGGAAATGAA GGAGAATTCC ACACTGGTGG TCGTGACTCA CGATGAAAGA ATAGCAGAGA AAGCGGACCG GGTTATAAGA ATAAGAGACG GTCAAATAGA ACAGGATATA TGTGAAAAAG CGTTGTAA
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Protein sequence | MIEVHNLWKE YNGKEKVTAL KGINLRINTG EFVVILGPSG SGKTTLLNCL SGVDRPTRGT VIIHGTDLYT LSEEERTRFR AENMGFVFQF FNLVPVLTAI ENVELPLLIL GVNRKEARER AFEILRKVGL AHKCDRFPEE LSGGEKQRVA IARAIVHNPK VIWADEPTGA LDNETGRMII DLLMEMKENS TLVVVTHDER IAEKADRVIR IRDGQIEQDI CEKAL
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