Gene TRQ2_0187 details

Gene Information

• Locus tag: TRQ2_0187
• Symbol: thrS
• ID: 6091590
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga sp. RQ2
• Kingdom: Bacteria
• Replicon accession: NC_010483
• Strand: +
• Start bp: 180647
• End bp: 182569
• Gene Length: 1923 bp
• Protein Length: 640 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 642487368
• Product: threonyl-tRNA synthetase
• Protein accession: YP_001738230
• Protein GI: 170287992
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00194489
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGATAA AGGTGAAGCT TCCAGATGGA AAAGAAAAAG AGTACGACAG AGGCATCACA 
CCGGCGGAGA TCGCAAAAGA ACTGGGCGTA AAAAAGGCGA TCGGAGCGGT TGTTAACGGT 
GAACTCTGGG ACCTGAAAAG ACCCATCGAA AATGACTGCG AACTGCGACT TGTAACTCTG 
GAGGATCCCG AGGCACCCGA GTTCTACAGA CACACCATGG CACACATCCT CGCACAGGCT 
GTGATGAGAA TTTATGGAAA AGAAAACGTA AAGCTGGGAA TCGGCCCCAC TATAGAGAAC 
GGTTTTTACT ACGACTTCGA CATAAAGAAC GGAAGACTCA CAGAGGAAGA TCTTCCAAAG 
ATAGAACAGG AGATGAAGAA GATAATAAAG GAAAATCTTC CTATAGAAAG AAAGGAGATC 
AGCAAAGAAG AGGCAAGAAA GCTTTTCAAC AATCAGCCTT ACAAACTCGA GCTCATAGAG 
GAGATCGAAG GTGACAGAGT AACGATCTAC CGTCAGGGAG AGTTCGTGGA TCTCTGCAGA 
GGCCCACATC TTCCTTCGAC GGGAATAGTG AAGCACTTCA AACTCCTCTC TGTTTCAGGT 
GCGTACTGGC GAGGTAGTGA GAAGAATCCC ATGCTCACAA GAGTTTACGG AACGGCCTTC 
GCTAAAAAGG AAGACCTCGA CAATTACTTG AAGTTCCTTG AAGAAGCGCA GCGGAGGGAC 
CACAGAAAAT TGGGACCTCA CCTCGAACTT TTCATGTTGA ACACTGAATA CGCTCCCGGT 
ATGCCGTTTT TCCTTCCAAA GGGAGTCGTC GTGCTCAACG AATTGATGAA ATTTTCCAGA 
GAACTCCATC GTGAGAGAGG ATACCAGGAG ATCTTCACAC CGCTCATAAT GAACGAGCAG 
CTCTGGAAGA TCTCCGGTCA CTGGGATCAC TACGCTGAGA ACATGTACTT CATAGAGAAA 
GACGAGGAAA GGTACGCGGT GAAACCCATG AACTGTCCCG GTCACATTCT CGTGTACAAG 
AGCAGAACTG TTTCCTACAG GGACCTACCG CTGAGATTCT TCGAGTTTGG CCGGGTTCAT 
AGATACGAAA GGAGCGGAGT TCTCCACGGT CTCATGAGGG TGAGATCCTT CACACAGGAC 
GATGCACACA TATTCTGCAC TCCCGGTCAG ATCGAAGAAG AGATACTCGG CGTTCTCGAT 
CTCATAAACA CCATCTACAG CCAATTCGGC TTCACCTACA GAGTGGAACT CAGCACGATG 
CCCGAAGATC ACATGGGTGA CGAAGCGATT TGGGAGAAGG CAACAACTGC CTTGAAGAAT 
GCCTTAGAAA GGGCCGGTCT TTCGTACAAA GTGAACGAGG GTGAAGGCGC TTTCTACGGT 
CCGAAAATAG ACTTCCACAT AAGAGATTCG ATAGGAAGAG AGTGGCAGTG CGCCACGATT 
CAGCTGGATT TCATGATGCC AGAGAAGTTC AACGTCACTT ACATAGGCCC AGACAACAAA 
GAGCACAGAG CCGTGATGAT ACACAGGGCG ATATACGGTT CGCTCGAAAG GTTCTTTGGC 
ATCCTGATAG AACACTTCGC TGGAGCGTTT CCAACCTGGC TGGCACCGAT CCAGGTGGCA 
GTTATTCCCA TATCAGAAAA ACACAACGAC GGTGCGGAAA AGATTGCAAA AAGGATCTCT 
CAGGAAGGGT TCAGGGTCTT CTTCGATAAC CGCCGTGAAA CTCTTGGATA CCGTATCAGA 
CAGGCTCAAA CCCAGAAAAT ACCGTACATG ATAATATTAG GCGACAAAGA GCTGGAGAGC 
GGAAAGATCT CCGTGAGAAC AAGAACAGGA AAAGAGATAA AAGACGTGGA CCTGGAACAC 
TTTGTTGAAA CCCTGAGAAA CGAAGTTTTG AGCAGAAAGC TCGAACTTTT GATGGAGGGA 
TGA 

 

Protein sequence

MKIKVKLPDG KEKEYDRGIT PAEIAKELGV KKAIGAVVNG ELWDLKRPIE NDCELRLVTL 
EDPEAPEFYR HTMAHILAQA VMRIYGKENV KLGIGPTIEN GFYYDFDIKN GRLTEEDLPK 
IEQEMKKIIK ENLPIERKEI SKEEARKLFN NQPYKLELIE EIEGDRVTIY RQGEFVDLCR 
GPHLPSTGIV KHFKLLSVSG AYWRGSEKNP MLTRVYGTAF AKKEDLDNYL KFLEEAQRRD 
HRKLGPHLEL FMLNTEYAPG MPFFLPKGVV VLNELMKFSR ELHRERGYQE IFTPLIMNEQ 
LWKISGHWDH YAENMYFIEK DEERYAVKPM NCPGHILVYK SRTVSYRDLP LRFFEFGRVH 
RYERSGVLHG LMRVRSFTQD DAHIFCTPGQ IEEEILGVLD LINTIYSQFG FTYRVELSTM 
PEDHMGDEAI WEKATTALKN ALERAGLSYK VNEGEGAFYG PKIDFHIRDS IGREWQCATI 
QLDFMMPEKF NVTYIGPDNK EHRAVMIHRA IYGSLERFFG ILIEHFAGAF PTWLAPIQVA 
VIPISEKHND GAEKIAKRIS QEGFRVFFDN RRETLGYRIR QAQTQKIPYM IILGDKELES 
GKISVRTRTG KEIKDVDLEH FVETLRNEVL SRKLELLMEG