Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0142 |
Symbol | |
ID | 6091544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 137480 |
End bp | 138277 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642487323 |
Product | Linocin_M18 bacteriocin protein |
Protein accession | YP_001738186 |
Protein GI | 170287948 |
COG category | [S] Function unknown |
COG ID | [COG1659] Uncharacterized protein, linocin/CFP29 homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTTC TGAAAAGATC CTTTGCTCCT CTGACAGAAA AACAGTGGCA GGAGATAGAC AACAGAGCAA GAGAGATCTT CAAAACACAG CTCTACGGAA GGAAATTCGT CGATGTGGAA GGTCCCTACG GCTGGGAGTA CGCTGCCCAT CCACTCGGGG AAGTTGAGGT GCTTTCAGAC GAGAACGAAG TGGTGAAGTG GGGATTGAGG AAGTCTCTGC CGCTCATCGA ACTGAGGGCA ACGTTCACTC TCGATCTGTG GGAACTCGAC AACCTCGAGA GAGGAAAACC GAACGTGGAT CTTTCCAGCT TAGAAGAAAC GGTGAGAAAG GTTGCGGAAT TTGAAGACGA AGTGATATTC AGAGGATGTG AAAAATCGGG TGTTAAAGGC CTTCTTTCCT TCGAAGAGAG GAAAATCGAA TGTGGAAGCA CACCGAAAGA CCTCCTCGAA GCCATAGTGA GGGCTCTTTC GATCTTCTCA AAAGATGGTA TAGAGGGCCC TTACACACTC GTCATAAACA CGGACAGATG GATCAACTTC CTGAAGGAAG AGGCAGGGCA TTACCCCCTC GAGAAGAGAG TGGAAGAATG CCTCAGGGGT GGCAAGATCA TAACCACACC GAGAATCGAG GATGCCCTCG TCGTTTCTGA GCGTGGAGGG GATTTCAAAT TGATCCTTGG ACAGGATCTC TCGATAGGGT ACGAAGACAG GGAAAAAGAC GCGGTGAGGC TTTTCATAAC GGAGACGTTC ACCTTCCAGG TTGTCAACCC GGAGGCCTTG ATTCTTCTAA AGTTCTGA
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Protein sequence | MEFLKRSFAP LTEKQWQEID NRAREIFKTQ LYGRKFVDVE GPYGWEYAAH PLGEVEVLSD ENEVVKWGLR KSLPLIELRA TFTLDLWELD NLERGKPNVD LSSLEETVRK VAEFEDEVIF RGCEKSGVKG LLSFEERKIE CGSTPKDLLE AIVRALSIFS KDGIEGPYTL VINTDRWINF LKEEAGHYPL EKRVEECLRG GKIITTPRIE DALVVSERGG DFKLILGQDL SIGYEDREKD AVRLFITETF TFQVVNPEAL ILLKF
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