| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0090 |
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| Symbol | |
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| ID | 6091490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga sp. RQ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010483 |
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| Strand | - |
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| Start bp | 81510 |
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| End bp | 83210 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642487270 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001738135 |
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| Protein GI | 170287897 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAGAA GATACAGAAA ATTGGGTGAA ATTCTTCTGG AAAAAGGATT CATAACCAGA
GAAGAACTGG ACAAGGCTCT TGAAATTCAA AAAGAGAAAA AAAAGCCGCT CGGAGAAGTT
CTAATTGAGA CAGGGTATAT CACGGAGGAT CAGCTGCTGG AGGCTTTGAG TGAACAATAC
GGAGTCCCAA TCCTGAAGGA ACTACCAAAA AACATACCAC TCAACGTGGT GGGTTCTATT
CCAAAGAACA TCATCGAATC TCTGCACGTC ATTCCTGTAG AAAAGAAGGA AGACGGAACT
CTCGTGGTGG TGACGGATAA CGGAACGAAC ATTCCAAGGA TCAAACAGGA GATACGTTTT
CTCACGGGGA AGAATTCGGA GATTTATCTG GTGACGAGCA GAGATTTTTC TGTTTTGTAT
CAAACGTATG TTCTTGGTGT TCCTCTCGAA CTTTTCGAGG AGCCTTACGT TGCCATAGAA
GAAACACCAG AACAGGTTGA GGAAGAAGAG GAAGAAGAAA GGGAAGTAGA AGAAGCTCCC
ATCGTCCGGC TCGTAAACAA TATCGTAAAC CGTGCCATAG AAATGGGAGC GAGTGATATC
CATATAGAAC CGATGAAAAG AACCGTGAGG GTGAGATTCA GAATAGATGG TATTTTGAGA
AAAGTTCTTG AGTATCAAAA GCCACAGCAC AACTCAGTTG TGGCACGAAT TAAAATTATG
AGTGGTCTCG ATGTGTCGGA AAGGAGGCTT CCGCAGGACG GGAAGTTTTA CACAATAAAA
AGCGGTGAGC AGTACGATTT TCGCGTGTCA ACCATGCCTT CCACTTTCGG AGAAAAAGTC
GTGATGAGGA TATTGAAGGT ATCCGATGCT AACAGGCGTC TCGAAGAACT AGGATACAGT
GAATACAACC TGAAACGAAT TCTATCACTG TTAGAAAAAC CCTACGGTAT CATCCTGGTT
ACCGGACCAA CGGGAAGCGG GAAATCCACT ACACTTGTCG CTATGATAAA TTATTTGAAG
AATGAAAGTG TGAACATAGT AACAGCGGAA GATCCTGTGG AATACACCAT CGAGGGGGTT
ACTCAGTGTC AGGTTTTCCC AGAAATAGGT CTCACGTTTG CGCGGTACTT GAGAGCTTTC
CTCAGGCAGG ACCCCGACAT CATCATGGTG GGTGAGATCA GAGACAGAGA AACCGCACAG
CTTGCGGTGG AAGCCTCCCT CACGGGACAC TTAGTTCTGA GTACGCTTCA CACCAACACC
GCTGCCGGTG CTGTCTCAAG GCTCATAGAA ATGGGAATAG ATCCTCACCT TCTCGGAGCC
TCCCTTATCG GAGTCATAGG TCAAAGGCTG GTGAGAAAGC TCTGTGATGA GTGTAAAATG
TCCGGAGAAA TCCGGGATGA ACAGGTAAAA TCTTATTTCG AACGATTCTT TGGAAAGGTA
CCGGATCAAA TTTACTATCC TTCAGAAGAG GGATGTTCTA CCTGCAAGGG GATGAGATAC
AGAGGGAGAA TGGCTATAGG GGAAGTTTTG ATTGTGGATG AAGAGTTGAG AGAATTGATC
TCTTCCAAAG CAAGTGAAAC AGAGATTGCA AAGCTTGCTG TGAAAAAAGG TATGCGCACC
ATGTTCCAGG ATGCCCTCGA GAAAGTCCTT CTTGGGCAGA CGAGCATCGA AGAGGTCTTC
AGGGTGACTA CACCGTTATG A
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| Protein sequence | MLRRYRKLGE ILLEKGFITR EELDKALEIQ KEKKKPLGEV LIETGYITED QLLEALSEQY
GVPILKELPK NIPLNVVGSI PKNIIESLHV IPVEKKEDGT LVVVTDNGTN IPRIKQEIRF
LTGKNSEIYL VTSRDFSVLY QTYVLGVPLE LFEEPYVAIE ETPEQVEEEE EEEREVEEAP
IVRLVNNIVN RAIEMGASDI HIEPMKRTVR VRFRIDGILR KVLEYQKPQH NSVVARIKIM
SGLDVSERRL PQDGKFYTIK SGEQYDFRVS TMPSTFGEKV VMRILKVSDA NRRLEELGYS
EYNLKRILSL LEKPYGIILV TGPTGSGKST TLVAMINYLK NESVNIVTAE DPVEYTIEGV
TQCQVFPEIG LTFARYLRAF LRQDPDIIMV GEIRDRETAQ LAVEASLTGH LVLSTLHTNT
AAGAVSRLIE MGIDPHLLGA SLIGVIGQRL VRKLCDECKM SGEIRDEQVK SYFERFFGKV
PDQIYYPSEE GCSTCKGMRY RGRMAIGEVL IVDEELRELI SSKASETEIA KLAVKKGMRT
MFQDALEKVL LGQTSIEEVF RVTTPL
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