Gene TRQ2_0062 details

Gene Information

• Locus tag: TRQ2_0062
• ID: 6091461
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga sp. RQ2
• Kingdom: Bacteria
• Replicon accession: NC_010483
• Strand: -
• Start bp: 56775
• End bp: 57197
• Gene Length: 423 bp
• Protein Length: 140 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 642487241
• Product: hypothetical protein
• Protein accession: YP_001738107
• Protein GI: 170287869
• COG category: [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1585] Membrane protein implicated in regulation of membrane protease activity

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0560345
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGCCT GGGTGTTCTG GCTCGTTCTC GGTGTGATCC TTATGGTTGC GGAAATTCTC 
ACACCTACAT TCTTCATATT CTGGTTTGGA GTGGGCGCCC TTGCCGCTTC TCTGGTATCA 
CTCTATCTTG GGGTGTACGT TCAAATCATA GTTTTTGCAG CTGTATCTAT AGTACTCGTC 
TTCCTCACGA GAAGGTTGGT TCAGAACTGG GAATCTCCGA GAAAGATCCA TGTTGAAGAG 
ATCGCTGGAA AGGTGGCTCT CGTCATTGAG ACAATAGACA ACAGAAAGGG AACTGGCCTT 
GTGAAGATCG ATGGAGATGT GTGGAGGGCG TACGCGGAAG ACGACGATGA GGTCATAGAG 
AAAGGAGAAC ACGTGAAGAT AATGAAGGTG GAAGGTGCCC ATGTGGTTGT AAAAAGAGTA 
TGA 

 

Protein sequence

MEAWVFWLVL GVILMVAEIL TPTFFIFWFG VGALAASLVS LYLGVYVQII VFAAVSIVLV 
FLTRRLVQNW ESPRKIHVEE IAGKVALVIE TIDNRKGTGL VKIDGDVWRA YAEDDDEVIE 
KGEHVKIMKV EGAHVVVKRV