Gene TRQ2_0047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_0047 
Symbol 
ID6091446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand+ 
Start bp42267 
End bp43391 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content48% 
IMG OID642487226 
Productsodium ion-translocating decarboxylase, beta subunit 
Protein accessionYP_001738092 
Protein GI170287854 
COG category[C] Energy production and conversion 
COG ID[COG1883] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit 
TIGRFAM ID[TIGR01109] sodium ion-translocating decarboxylase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCGATTT TATCAGCCCT GGCAAATTTC TTCGCCCAAA CAGCGTTCCC ACATCTCACA 
TTTGGAAACA TAGCCATGTT CGCAGTGGCC ATTGCCCTGC TCTACGTAGC CATAGTGAAA 
CACTCGGAAC CGCTTCTTTT GATTCCCATA GCCTTCGGAA TCATTCTTGC GAACATACCC 
GTTGAAACTA CAGGAATACT GAACGAAGGT GGTTTTCTCT TCTATATAAA GAAGGGCCTT 
GACCTGGGAA TCTATCCTCC TCTCATCTTC CTCGGAATAG GCGCCCTCAC AGATTTTTCC 
TTCATGCTCT CGTACCCGAT CACCATCTTT CTCGGTGCGG CTGCACAGAT GGGAATATTT 
TTCACCTTTT TTGTGGCAAA GGTTCTAGGA TTTTCTCTGA AACAGGCGGC TTCCATCGCC 
ATCATAGGTG GTGCAGATGG GCCAACCGCC ATTTACATAA CGAACACACT ATCCCCAGAA 
TTGATCGCCC CCATAGCCAT ATCTGCTTAT TCCTACATCG CTCTCATTCC CATCCTCCAA 
CCCGTCGTTT CCAGAATTTT AGTAAGCAAA GAAGAACGAA AAATCAAAAT GAAACCACCA 
AGAAAGGTGA GCAGATTCGA GAGACTTTCA TTTCCGATAG TGATAACAAT AGCAACCGCT 
CTTCTGATTC CAAAGTCGCT CCCTCTGGTT GGATCTCTCA TGTTTGGAAA CCTCCTCAGA 
GAAGCGGGGA TTGTGAAAAG ACTCGTTGAA GCCGCCAGCA GGTACATACT CGACACGGTG 
ACGATCCTTC TCATGCTTTC AGTTGGGGCT TCTGCAAGAG CCGATGTTTT CTTGACCCCC 
CAGAGTCTGA TGATATTCTT TCTCGGAGCA GTCGCTTTCA TTGTGTCAAT GAGTTCTGGG 
ATTCTGTTTG CGAAATTCAT GAACCTGTTT TTGAAGGACA AAATAAACCC GCTCATAGGA 
GCGGCTGGCG TTTCTGCCGT ACCAGATTCT GCCAGAGTTG CACAGAAACT CGCTCAGGAA 
GAAGATCCAA GGAATCACAT ACTCATGCAC GCAATGGGAC CCAACGTGGC GGGAGTCATA 
GGCTCAGCCA CTGTGGCAGG AGTGTTTCTG ATGTTCCTCA GCTGA
 
Protein sequence
MSILSALANF FAQTAFPHLT FGNIAMFAVA IALLYVAIVK HSEPLLLIPI AFGIILANIP 
VETTGILNEG GFLFYIKKGL DLGIYPPLIF LGIGALTDFS FMLSYPITIF LGAAAQMGIF 
FTFFVAKVLG FSLKQAASIA IIGGADGPTA IYITNTLSPE LIAPIAISAY SYIALIPILQ 
PVVSRILVSK EERKIKMKPP RKVSRFERLS FPIVITIATA LLIPKSLPLV GSLMFGNLLR 
EAGIVKRLVE AASRYILDTV TILLMLSVGA SARADVFLTP QSLMIFFLGA VAFIVSMSSG 
ILFAKFMNLF LKDKINPLIG AAGVSAVPDS ARVAQKLAQE EDPRNHILMH AMGPNVAGVI 
GSATVAGVFL MFLS