Gene TRQ2_0012 details

Gene Information

• Locus tag: TRQ2_0012
• Symbol: rnhB
• ID: 6091411
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga sp. RQ2
• Kingdom: Bacteria
• Replicon accession: NC_010483
• Strand: +
• Start bp: 11890
• End bp: 12606
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 642487191
• Product: ribonuclease HII
• Protein accession: YP_001738057
• Protein GI: 170287819
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0164] Ribonuclease HII

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAATAG ATGAGCTCTA CAAAAAAGAG TTTGGAATCG TAGCAGGTGT GGATGAGGCG 
GGAAGAGGGT GCCTCGCAGG CCCTGTTGTG GCGGCCGCTG TCGTTCTGGA AAAAGAAATA 
GAAGGAATAA ACGATTCAAA ACAGCTTTCC CCTGCGAAGA GGGAAAGACT TTTCGATGAA 
ATAATGGGGA AAGCAGCTGT TGGTATAGGA ATTGCCTCTC CAGAGGAAAT AGATCTTCAC 
AACATATTCA ACGCCACAAA ACTCGCTATG AATCGAGCAC TGGAGAATCT GTCCGTGGGA 
CCATCATTTG TACTCGTTGA CGGGAAAGGA ATCGAGTTGA GAGTTCCCGG TACATGCTTA 
GTGAAGGGAG ACCAGAAAAG CAAATTGATA GGAGCAGCTT CCATTGTTGC GAAGGTCTTC 
AGAGATAGAT TGATGAGCGA GTTTCACAAG ATGTATCCCC AGTTTTCCTT CCACAAACAC 
AAAGGTTACG CAACAAAAGA ACACCTGAAC GAAATCAGAA AGAATGGAGT TTTGCCCATC 
CACCGGATGA GTTTTGAACC TGTTTTAGAA CTTCTGACCG ACGATTTGCT GAGGGAGTTC 
TTCGAAAAAG GCCTCATCTC CGAAAATCGA TTCGAACATA TAAAGAATCT TCTGGAGGCG 
AAAAAGAGTG TGGTTTTCCG GAAAGAAAGA ACAGACCATA ATCTCCCTCT TTTTTAA 

 

Protein sequence

MGIDELYKKE FGIVAGVDEA GRGCLAGPVV AAAVVLEKEI EGINDSKQLS PAKRERLFDE 
IMGKAAVGIG IASPEEIDLH NIFNATKLAM NRALENLSVG PSFVLVDGKG IELRVPGTCL 
VKGDQKSKLI GAASIVAKVF RDRLMSEFHK MYPQFSFHKH KGYATKEHLN EIRKNGVLPI 
HRMSFEPVLE LLTDDLLREF FEKGLISENR FEHIKNLLEA KKSVVFRKER TDHNLPLF