Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_4274 |
Symbol | |
ID | 6068077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 4727766 |
End bp | 4729382 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641603711 |
Product | porin LamB type |
Protein accession | YP_001727197 |
Protein GI | 170022243 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4580] Maltoporin (phage lambda and maltose receptor) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAGAC GAAATCTTAT TACCTCTGCC ATCTTATTAA TGGCACCGTT AGCCTTTTCT GCACAATCAT TGGCTGAATC ATTAACGGTG GAACAACGCC TTGAGTTATT AGAAAAGGCG TTAAGAGAAA CGCAAAGCGA ACTCAAAAAG TATAAAGATG AAGAGAAGAA AAAGTATACG CCAGCGACGG TGAATCGTAG CGTAAGTACG AATGATCAAG GGTATGCCGC CAATCCGTTC CCGACCAGTA GTGCCGCAAA ACCTGATGCT GTACTGGTCA AAAATGAAGA GAAAAATGCC AGTGAGACAG GCTCGATTTA TTCTTCCATG ACTCTGAAAG ATTTCAGTAA ATTTGTGAAA GATGAAATTG GCTTTAGTTA CAACGGCTAT TACCGTTCTG GTTGGGGGAC CGCCTCTCAT GGTTCACCTA AATCATGGGC GATTGGTTCT CTGGGCCGCT TTGGTAACGA ATACTCCGGC TGGTTTGATT TGCAGTTAAA ACAACGTGTC TACAACGAAA ACGGCAAACG GGTTGATGCC GTTGTGATGA TGGATGGTAA CGTTGGTCAG CAGTACTCTA CCGGCTGGTT TGGCGATAAC GCCGGTGGCG AGAACTATAT GCAGTTCTCC GATATGTACG TTACCACCAA AGGTTTCCTG CCCTTTGCGC CAGAGGCTGA TTTCTGGGTG GGTAAACACG GTGCGCCGAA AATTGAAATC CAGATGCTTG ACTGGAAAAC GCAGCGTACT GATGCCGCAG CGGGTGTAGG TCTGGAAAAC TGGAAAGTCG GTCCGGGTAA AATTGATATC GCGCTGGTTC GCGAAGATGT CGATGATTAC GATCGCAGCC TGCAAAACAA ACAGCAGATT AATACCAATA CCATTGATTT ACGCTATAAA GATATCCCGT TATGGGATAA AGCCACCTTA ATGGTAAGTG GTCGTTATGT CACGGCAAAC GAAAGCGCAT CGGAAAAAGA TAATCAGGAT AATAACGGGT ATTATGACTG GAAAGATACC TGGATGTTTG GCACATCTTT AACGCAGAAA TTTGATAAAG GTGGCTTCAA CGAATTCTCC TTCCTGGTCG CGAATAATTC TATCGCCAGT AACTTTGGCC GTTATGCTGG CGCAAGTCCA TTTACCACCT TTAATGGTCG TTATTATGGT GATCACACCG GCGGAACAGC GGTACGTCTG ACTTCGCAGG GCGAAGCCTA TATTGGCGAT CATTTCATTG TAGCTAACGC GATTGTTTAC TCCTTCGGTA ACGATATATA TAGCTACGAA ACAGGCGCCC ACTCTGATTT CGAATCTATT CGTGCGGTTG TTCGCCCGGC CTATATTTGG GACCAATATA ACCAGACAGG TGTTGAACTG GGCTATTTCA CCCAGCAAAA CAAAGATGCG AATAGTAATA AATTTAATGA GTCTGGTTAT AAAACCACGC TCTTCCATAC CTTTAAAGTC AATACCAGTA TGTTGACCTC GCGTCCGGAA ATTCGTTTCT ACGCCACGTA TATCAAAGCC CTGGAAAACG AACTGGATGG CTTCACCTTT GAAGACAATA AAGACGACCA GTTTGCTGTC GGTGCCCAGG CTGAAATCTG GTGGTAA
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Protein sequence | MFRRNLITSA ILLMAPLAFS AQSLAESLTV EQRLELLEKA LRETQSELKK YKDEEKKKYT PATVNRSVST NDQGYAANPF PTSSAAKPDA VLVKNEEKNA SETGSIYSSM TLKDFSKFVK DEIGFSYNGY YRSGWGTASH GSPKSWAIGS LGRFGNEYSG WFDLQLKQRV YNENGKRVDA VVMMDGNVGQ QYSTGWFGDN AGGENYMQFS DMYVTTKGFL PFAPEADFWV GKHGAPKIEI QMLDWKTQRT DAAAGVGLEN WKVGPGKIDI ALVREDVDDY DRSLQNKQQI NTNTIDLRYK DIPLWDKATL MVSGRYVTAN ESASEKDNQD NNGYYDWKDT WMFGTSLTQK FDKGGFNEFS FLVANNSIAS NFGRYAGASP FTTFNGRYYG DHTGGTAVRL TSQGEAYIGD HFIVANAIVY SFGNDIYSYE TGAHSDFESI RAVVRPAYIW DQYNQTGVEL GYFTQQNKDA NSNKFNESGY KTTLFHTFKV NTSMLTSRPE IRFYATYIKA LENELDGFTF EDNKDDQFAV GAQAEIWW
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