Gene EcolC_4259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_4259 
Symbol 
ID6068001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4709585 
End bp4710118 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content52% 
IMG OID641603696 
ProductF0F1 ATP synthase subunit delta 
Protein accessionYP_001727182 
Protein GI170022228 
COG category[C] Energy production and conversion 
COG ID[COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 
TIGRFAM ID[TIGR01145] ATP synthase, F1 delta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000372939 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0353407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAT TTATTACGGT AGCTCGCCCC TACGCCAAAG CAGCTTTTGA CTTTGCCGTC 
GAACACCAAA GTGTAGAACG CTGGCAGGAC ATGCTGGCGT TTGCCGCCGA GGTAACCAAA
AACGAACAAA TGGCAGAGCT TCTCTCTGGC GCGCTTGCGC CAGAAACGCT CGCCGAGTCG
TTTATCGCAG TTTGTGGTGA GCAACTGGAC GAAAACGGTC AGAACCTGAT TCGGGTTATG
GCTGAAAATG GTCGTCTTAA CGCGCTCCCG GATGTTCTGG AGCAGTTTAT TCACCTGCGT
GCCGTGAGTG AGGCTACCGC TGAGGTAGAC GTCATTTCCG CTGCCGCACT GAGTGAACAA
CAGCTCGCGA AAATTTCTGC TGCGATGGAA AAACGTCTGT CACGCAAAGT TAAGCTGAAT
TGCAAAATCG ATAAGTCTGT AATGGCAGGC GTTATCATCC GAGCGGGTGA TATGGTCATT
GATGGCAGCG TACGCGGTCG TCTTGAGCGC CTTGCAGACG TCTTGCAGTC TTAA
 
Protein sequence
MSEFITVARP YAKAAFDFAV EHQSVERWQD MLAFAAEVTK NEQMAELLSG ALAPETLAES 
FIAVCGEQLD ENGQNLIRVM AENGRLNALP DVLEQFIHLR AVSEATAEVD VISAAALSEQ
QLAKISAAME KRLSRKVKLN CKIDKSVMAG VIIRAGDMVI DGSVRGRLER LADVLQS