Gene EcolC_4247 details

Gene Information

• Locus tag: EcolC_4247
• Symbol: trkD
• ID: 6067959
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli ATCC 8739
• Kingdom: Bacteria
• Replicon accession: NC_010468
• Strand: -
• Start bp: 4696804
• End bp: 4698672
• Gene Length: 1869 bp
• Protein Length: 622 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 641603684
• Product: potassium transport protein Kup
• Protein accession: YP_001727170
• Protein GI: 170022216
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG3158] K+ transporter
• TIGRFAM ID: [TIGR00794] potassium uptake protein

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.0103348
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCACTG ATAATAAGCA ATCATTGCCC GCGATTACCC TCGCGGCGAT TGGAGTTGTC 
TACGGCGATA TTGGTACCAG CCCGTTATAT ACACTTCGTG AATGTTTGTC CGGCCAGTTT 
GGTTTTGGCG TTGAACGCGA TGCCGTGTTT GGCTTTTTAT CGCTGATCTT CTGGCTGCTA 
ATCTTTGTGG TTTCCATTAA ATATCTCACC TTCGTGATGC GGGCAGATAA CGCCGGTGAG 
GGGGGGATCC TGACGTTGAT GTCGCTTGCC GGGCGTAATA CGTCGGCGCG AACCACATCA 
ATGCTGGTGA TTATGGGGCT AATCGGCGGC AGCTTTTTCT ATGGTGAAGT CGTCATAACA 
CCCGCTATTT CGGTGATGTC AGCCATTGAA GGTCTGGAAA TCGTCGCCCC GCAGCTGGAT 
ACCTGGATAG TTCCCCTCTC AATTATCGTT CTCACTTTAT TATTTATGAT TCAAAAACAT 
GGCACGGCTA TGGTCGGTAA GCTGTTTGCG CCGATCATGC TGACCTGGTT TTTGATTCTG 
GCAGGACTGG GGTTACGTAG CATTATTGCT AACCCGGAAG TGCTGCATGC GCTGAATCCA 
ATGTGGGCGG TGCATTTCTT CCTTGAATAC AAAACGGTTT CTTTTATTGC ATTAGGGGCA 
GTGGTGTTGT CGATTACGGG GGTCGAGGCG CTGTATGCTG ATATGGGGCA CTTTGGTAAG 
TTCCCTATTC GCCTGGCGTG GTTCACCGTC GTATTACCTT CCTTGACCCT TAATTACTTC 
GGTCAGGGAG CGCTGTTGTT AAAGAACCCG GAAGCGATTA AGAACCCGTT CTTCCTGTTG 
GCACCGGACT GGGCGCTGAT CCCGCTGCTG ATCATCGCCG CACTGGCGAC GGTAATTGCC 
TCGCAGGCGG TTATCTCTGG CGTCTTCTCA TTGACGCGTC AGGCGGTACG TCTGGGATAT 
TTGTCGCCGA TGCGCATTAT TCACACCTCC GAAATGGAGT CAGGGCAAAT CTATATTCCG 
TTTGTGAACT GGATGCTCTA TGTCGCGGTC GTGATTGTGA TTGTCAGCTT TGAGCACTCC 
AGCAACCTGG CGGCGGCGTA CGGGATTGCG GTGACCGGAA CCATGGTGCT GACGTCTATT 
CTCTCGACTA CCGTGGCACG TCAGAACTGG CACTGGAATA AGTATTTTGT TGCGCTGATC 
CTGATTGCTT TCCTTTGTGT CGATATTCCA TTGTTCACCG CTAACCTCGA TAAACTGCTC 
TCCGGCGGCT GGTTGCCATT GAGCCTCGGT ACTGTGATGT TTATCGTGAT GACCACCTGG 
AAGAGCGAGC GTTTCCGCTT GCTGCGGCGG ATGCATGAAC ATGGTAACTC TCTGGAAGCG 
ATGATTGCTT CGCTGGAGAA ATCACCGCCT GTTCGCGTGC CCGGGACCGC GGTGTATATG 
TCGCGTGCAA TCAACGTCAT TCCCTTTGCG CTGATGCATA ACCTTAAACA TAACAAGGTA 
TTGCATGAGC GGGTGATTCT GTTAACTCTG CGTACCGAAG ACGCGCCATA TGTCCATAAT 
GTCCGTCGGG TACAGATTGA ACAACTGTCG CCCACTTTCT GGCGCGTGGT GGCAAGTTAT 
GGTTGGCGAG AAACGCCAAA CGTGGAAGAA GTTTTCCACC GCTGCGGTCT GGAAGGATTA 
AGTTGCCGGA TGATGGAAAC CTCCTTCTTT ATGTCGCATG AGTCGTTGAT CCTCGGCAAA 
CGCCCGTGGT ATTTGCGTCT GCGCGGCAAG CTGTACTTGC TGCTGCAACG TAATGCGCTG 
CGTGCACCAG ATCAATTTGA AATTCCGCCA AACAGGGTTA TCGAACTGGG TACTCAGGTC 
GAAATCTAA 

 

Protein sequence

MSTDNKQSLP AITLAAIGVV YGDIGTSPLY TLRECLSGQF GFGVERDAVF GFLSLIFWLL 
IFVVSIKYLT FVMRADNAGE GGILTLMSLA GRNTSARTTS MLVIMGLIGG SFFYGEVVIT 
PAISVMSAIE GLEIVAPQLD TWIVPLSIIV LTLLFMIQKH GTAMVGKLFA PIMLTWFLIL 
AGLGLRSIIA NPEVLHALNP MWAVHFFLEY KTVSFIALGA VVLSITGVEA LYADMGHFGK 
FPIRLAWFTV VLPSLTLNYF GQGALLLKNP EAIKNPFFLL APDWALIPLL IIAALATVIA 
SQAVISGVFS LTRQAVRLGY LSPMRIIHTS EMESGQIYIP FVNWMLYVAV VIVIVSFEHS 
SNLAAAYGIA VTGTMVLTSI LSTTVARQNW HWNKYFVALI LIAFLCVDIP LFTANLDKLL 
SGGWLPLSLG TVMFIVMTTW KSERFRLLRR MHEHGNSLEA MIASLEKSPP VRVPGTAVYM 
SRAINVIPFA LMHNLKHNKV LHERVILLTL RTEDAPYVHN VRRVQIEQLS PTFWRVVASY 
GWRETPNVEE VFHRCGLEGL SCRMMETSFF MSHESLILGK RPWYLRLRGK LYLLLQRNAL 
RAPDQFEIPP NRVIELGTQV EI