Gene EcolC_4241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_4241 
Symbol 
ID6067932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4690769 
End bp4691761 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content51% 
IMG OID641603678 
Producttranscriptional repressor RbsR 
Protein accessionYP_001727164 
Protein GI170022210 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.327464 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00680444 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGCTACAA TGAAAGATGT TGCCCGCCTG GCGGGCGTTT CTACCTCAAC AGTTTCTCAC 
GTTATCAATA AAGATCGCTT CGTCAGTGAA GCGATTACCG CCAAAGTTGA AGCGGCGATT
AAAGAACTCA ATTACGCGCC ATCAGCTCTG GCGCGTAGCC TCAAACTCAA TCAAACACAT
ACCATTGGCA TGTTGATCAC TGCCAGTACC AATCCTTTCT ATTCAGAACT GGTGCGTGGC
GTTGAACGCA GCTGCTTCGA ACGCGGTTAT AGTCTCGTCC TTTGCAATAC CGAAGGCGAT
GAACAGCGGA TGAATCGCAA TCTGGAAACG CTGATGCAAA AACGCGTTGA TGGCTTGCTG
TTACTGTGCA CCGAAACGCA TCAACCTTCG CGTGAAATCA TGCAACGTTA TCCGACAGTG
CCTACTGTGA TGATGGACTG GGCTCCGTTC GATGGCGACA GCGATCTTAT TCAGGATAAC
TCGTTGCTGG GCGGAGACTT AGCAACGCAA TATCTGATCG ATAAAGGTCA TACCCGTATC
GCCTGTATTA CCGGCCCGCT GGATAAAACT CCGGCGCGCC TGCGGTTGGA AGGTTATCGG
GCGGCGATGA AACGTGCGGG TCTCAACATT CCTGATGGCT ATGAAGTCAC TGGTGATTTT
GAATTTAACG GCGGGTTTGA CGCTATGCGC CAACTGCTAT CACATCCGCT GCGTCCTCAG
GCCGTCTTTA CCGGAAATGA CGCTATGGCT GTTGGCGTTT ACCAGGCGTT ATATCCGGCA
GAGTTACAGG TTCCGCAGGA TATCGCGGTG ATTGGCTATG ACGATATCGA ACTGGCAAGC
TTTATGACGC CACCATTAAC CACTATCCAC CAACCGAAAG ATGAACTGGG GGAGCTGGCG
ATTGATGTAC TCATCCATCG GATAACCCAG CCGACCCTTC AGCAACAACG ATTACAACTT
ACTCCGATTC TGATGGAACG CGGTTCGGCT TAG
 
Protein sequence
MATMKDVARL AGVSTSTVSH VINKDRFVSE AITAKVEAAI KELNYAPSAL ARSLKLNQTH 
TIGMLITAST NPFYSELVRG VERSCFERGY SLVLCNTEGD EQRMNRNLET LMQKRVDGLL
LLCTETHQPS REIMQRYPTV PTVMMDWAPF DGDSDLIQDN SLLGGDLATQ YLIDKGHTRI
ACITGPLDKT PARLRLEGYR AAMKRAGLNI PDGYEVTGDF EFNGGFDAMR QLLSHPLRPQ
AVFTGNDAMA VGVYQALYPA ELQVPQDIAV IGYDDIELAS FMTPPLTTIH QPKDELGELA
IDVLIHRITQ PTLQQQRLQL TPILMERGSA