| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_4225 |
|---|
| Symbol | |
|---|
| ID | 6067822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 4667286 |
|---|
| End bp | 4669307 |
|---|
| Gene Length | 2022 bp |
|---|
| Protein Length | 673 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641603657 |
|---|
| Product | ATP-dependent DNA helicase Rep |
|---|
| Protein accession | YP_001727149 |
|---|
| Protein GI | 170022195 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTAA ACCCCGGCCA ACAACAAGCT GTCGAATTCG TTACCGGCCC CTGCCTGGTG
CTGGCGGGCG CGGGTTCCGG TAAAACTCGT GTTATCACCA ATAAAATCGC CCATCTGATC
CGCGGTTGCG GTTATCAGGC GCGGCACATT GCGGCGGTGA CCTTTACTAA TAAAGCAGCG
CGCGAGATGA AAGAGCGTGT AGGGCAGACG CTGGGGCGCA AAGAGGCGCG TGGGCTGATG
ATCTCCACTT TCCATACGTT GGGGCTGGAT ATCATCAAAC GCGAGTATGC GGCGCTTGGG
ATGAAAGCGA ACTTCTCGTT GTTTGACGAT ACCGATCAGC TTGCTTTGCT TAAAGAGTTG
ACCGAGGGGC TGATTGAAGA TGACAAAGTT CTCCTGCAAC AACTGATTTC GACCATCTCT
AACTGGAAGA ATGATCTCAA AACACCGTCC CAGGCGGCAG CAAGTGCGAT TGGCGAGCGG
GACCGTATTT TTGCCCATTG TTATGGGCTG TATGATGCAC ACCTGAAAGC CTGTAACGTT
CTCGACTTCG ATGATCTGAT TTTATTGCCG ACGTTGCTGC TGCAACGCAA TGAAGAAGTC
CGCGAGCGCT GGCAGAACAA AATTCGCTAT CTGCTGGTGG ATGAGTATCA GGACACCAAC
ACCAGCCAGT ATGAGCTGGT GAAACTGCTG GTGGGCAGCC GCGCGCGCTT TACCGTGGTG
GGTGACGATG ACCAGTCGAT CTACTCCTGG CGCGGTGCAC GTCCGCAAAA CCTGGTGCTG
CTGAGTCAGG ATTTTCCGGC GCTGAAGGTG ATTAAGCTTG AGCAGAACTA TCGCTCTTCC
GGGCGTATTC TGAAAGCGGC GAACATCCTG ATCGCCAATA ACCCGCACGT CTTTGAAAAG
CGTCTGTTCT CCGAACTGGG TTATGGCGCG GAGCTAAAAG TATTAAGCGC GAATAACGAA
GAACATGAGG CTGAGCGCGT TACTGGCGAG CTGATCGCCC ATCACTTCGT CAATAAAACG
CAGTACAAAG ATTACGCCAT TCTTTATCGC GGTAACCATC AGTCGCGGGT GTTTGAAAAA
TTCCTGATGC AAAACCGCAT CCCGTACAAA ATATCTGGTG GTACGTCGTT TTTCTCTCGT
CCTGAAATCA AGGACTTGCT GGCTTATCTG CGCGTGCTGA CTAACCCGGA CGATGACAGC
GCATTTCTGC GTATCGTTAA CACGCCGAAG CGAGAGATTG GCCCGGCTAC GCTGAAAAAG
CTGGGTGAGT GGGCGATGAC GCGCAATAAA AGCATGTTTA CCGCCAGCTT TGATATGGGC
CTGAGTCAGA CGCTTAGCGG ACGTGGTTAT GAAGCATTGA CCCGCTTCAC TCACTGGTTG
GCAGAAATCC AGCGTCTGGC GGAGCGGGAG CCGATTGCCG CGGTGCGTGA TCTGATCCAT
GGCATGGATT ATGAATCCTG GCTGTACGAA ACATCGCCCA GCCCGAAAGC CGCCGAAATG
CGCATGAAGA ACGTCAACCA ACTGTTTAGC TGGATGACGG AGATGCTGGA AGGCAGTGAA
CTGGATGAGC CGATGACGCT CACCCAGGTG GTGACGCGCT TTACTTTGCG CGACATGATG
GAGCGTGGTG AGAGTGAAGA AGAGCTGGAT CAGGTGCAAC TGATGACTCT CCACGCGTCG
AAAGGGCTGG AGTTTCCTTA TGTCTACATG GTCGGTATGG AAGAAGGGTT TTTGCCGCAC
CAGAGCAGCA TCGATGAAGA TAATATCGAT GAGGAGCGGC GGCTGGCCTA TGTCGGCATT
ACCCGCGCCC AGAAGGAATT GACCTTTACG CTGTGTAAAG AACGCCGTCA GTACGGCGAA
CTGGTGCGCC CGGAGCCGAG CCGCTTTTTG CTGGAGCTGC CGCAGGATGA TCTGATTTGG
GAACAGGAGC GCAAAGTGGT CAGCGCCGAA GAACGGATGC AGAAAGGGCA AAGCCATCTG
GCGAATCTGA AAGCGATGAT GGCGGCAAAA CGAGGGAAAT AA
|
|---|
| Protein sequence | MRLNPGQQQA VEFVTGPCLV LAGAGSGKTR VITNKIAHLI RGCGYQARHI AAVTFTNKAA
REMKERVGQT LGRKEARGLM ISTFHTLGLD IIKREYAALG MKANFSLFDD TDQLALLKEL
TEGLIEDDKV LLQQLISTIS NWKNDLKTPS QAAASAIGER DRIFAHCYGL YDAHLKACNV
LDFDDLILLP TLLLQRNEEV RERWQNKIRY LLVDEYQDTN TSQYELVKLL VGSRARFTVV
GDDDQSIYSW RGARPQNLVL LSQDFPALKV IKLEQNYRSS GRILKAANIL IANNPHVFEK
RLFSELGYGA ELKVLSANNE EHEAERVTGE LIAHHFVNKT QYKDYAILYR GNHQSRVFEK
FLMQNRIPYK ISGGTSFFSR PEIKDLLAYL RVLTNPDDDS AFLRIVNTPK REIGPATLKK
LGEWAMTRNK SMFTASFDMG LSQTLSGRGY EALTRFTHWL AEIQRLAERE PIAAVRDLIH
GMDYESWLYE TSPSPKAAEM RMKNVNQLFS WMTEMLEGSE LDEPMTLTQV VTRFTLRDMM
ERGESEEELD QVQLMTLHAS KGLEFPYVYM VGMEEGFLPH QSSIDEDNID EERRLAYVGI
TRAQKELTFT LCKERRQYGE LVRPEPSRFL LELPQDDLIW EQERKVVSAE ERMQKGQSHL
ANLKAMMAAK RGK
|
|---|
| |