Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_4193 |
Symbol | |
ID | 6067513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 4630485 |
End bp | 4631249 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641603621 |
Product | periplasmic protein |
Protein accession | YP_001727117 |
Protein GI | 170022163 |
COG category | [S] Function unknown |
COG ID | [COG3698] Predicted periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCATC AGCTACTCAT TGGTAAAGGA ATGATCACCT TGAATCTCAA ACGGATTTTT CTCGCCCTCA CCTTACTTCC CTTGTTTGCT GTTGCCGCTG ATGATTGCGC ACTCTCAGAT CCGACGCTGA CCGTACAGGC GTATACCGTT AATCCTCAAA CAGAGCGGGT GAAAATGTAC TGGCAAAAAG CCAATGGCGA AGCGTGGGGA ACGTTACATG CTCTGCTGGC GGATATGAAT AGTCAGGGTC AGGTGCAGAT GGCGATGAAC GGCGGCATCT ATGATGAAAG CTATGCGCCG CTCGGTTTGT ACATCGAAAA CGGTCAGCAG AAGGTGGCGT TAAATCTCGC TTCAGGTGAA GGGAATTTCT TTATCCGTCC TGGCGGCGTG TTTTATGTCG CGGGAGATAA AGTCGGCATC GTTCGTCTGG ATGCCTTCAA AACCAGTAAA GAGATTCAGT TTGCGGTGCA GTCAGGGCCA ATGTTGATGG AAAACGGTGT AATTAATCCG CGTATTCATC CCAACGTCGC CTCAAGCAAA ATTCGTAACG GTGTTGGGAT TAATAAACAT GGGAACGCCG TGTTTTTGTT GAGCCAGCAG GCAACAAATT TTTATGATTT TGCCTGTTAT GCCAAAGCGA AACTGAACGT TGAGCAGCTG CTTTATCTTG ATGGCACGAT TTCACATATG TATATGAAAG GCGGGGCAAT CCCGTGGCAA CGCTATCCTT TTGTCACCAT GATTTCCGTC GAGCGGAAAG GTTAA
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Protein sequence | MAHQLLIGKG MITLNLKRIF LALTLLPLFA VAADDCALSD PTLTVQAYTV NPQTERVKMY WQKANGEAWG TLHALLADMN SQGQVQMAMN GGIYDESYAP LGLYIENGQQ KVALNLASGE GNFFIRPGGV FYVAGDKVGI VRLDAFKTSK EIQFAVQSGP MLMENGVINP RIHPNVASSK IRNGVGINKH GNAVFLLSQQ ATNFYDFACY AKAKLNVEQL LYLDGTISHM YMKGGAIPWQ RYPFVTMISV ERKG
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