Gene EcolC_4193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_4193 
Symbol 
ID6067513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4630485 
End bp4631249 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content48% 
IMG OID641603621 
Productperiplasmic protein 
Protein accessionYP_001727117 
Protein GI170022163 
COG category[S] Function unknown 
COG ID[COG3698] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCATC AGCTACTCAT TGGTAAAGGA ATGATCACCT TGAATCTCAA ACGGATTTTT 
CTCGCCCTCA CCTTACTTCC CTTGTTTGCT GTTGCCGCTG ATGATTGCGC ACTCTCAGAT
CCGACGCTGA CCGTACAGGC GTATACCGTT AATCCTCAAA CAGAGCGGGT GAAAATGTAC
TGGCAAAAAG CCAATGGCGA AGCGTGGGGA ACGTTACATG CTCTGCTGGC GGATATGAAT
AGTCAGGGTC AGGTGCAGAT GGCGATGAAC GGCGGCATCT ATGATGAAAG CTATGCGCCG
CTCGGTTTGT ACATCGAAAA CGGTCAGCAG AAGGTGGCGT TAAATCTCGC TTCAGGTGAA
GGGAATTTCT TTATCCGTCC TGGCGGCGTG TTTTATGTCG CGGGAGATAA AGTCGGCATC
GTTCGTCTGG ATGCCTTCAA AACCAGTAAA GAGATTCAGT TTGCGGTGCA GTCAGGGCCA
ATGTTGATGG AAAACGGTGT AATTAATCCG CGTATTCATC CCAACGTCGC CTCAAGCAAA
ATTCGTAACG GTGTTGGGAT TAATAAACAT GGGAACGCCG TGTTTTTGTT GAGCCAGCAG
GCAACAAATT TTTATGATTT TGCCTGTTAT GCCAAAGCGA AACTGAACGT TGAGCAGCTG
CTTTATCTTG ATGGCACGAT TTCACATATG TATATGAAAG GCGGGGCAAT CCCGTGGCAA
CGCTATCCTT TTGTCACCAT GATTTCCGTC GAGCGGAAAG GTTAA
 
Protein sequence
MAHQLLIGKG MITLNLKRIF LALTLLPLFA VAADDCALSD PTLTVQAYTV NPQTERVKMY 
WQKANGEAWG TLHALLADMN SQGQVQMAMN GGIYDESYAP LGLYIENGQQ KVALNLASGE
GNFFIRPGGV FYVAGDKVGI VRLDAFKTSK EIQFAVQSGP MLMENGVINP RIHPNVASSK
IRNGVGINKH GNAVFLLSQQ ATNFYDFACY AKAKLNVEQL LYLDGTISHM YMKGGAIPWQ
RYPFVTMISV ERKG