Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_4177 |
Symbol | |
ID | 6067267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 4614467 |
End bp | 4615228 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641603605 |
Product | uridine phosphorylase |
Protein accession | YP_001727101 |
Protein GI | 170022147 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2820] Uridine phosphorylase |
TIGRFAM ID | [TIGR01718] uridine phosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0246384 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAGT CTGATGTTTT TCATCTCGGC CTCACTAAAA ACGATTTACA AGGGGCTACG CTTGCCATCG TCCCTGGCGA CCCGGATCGT GTGGAAAAGA TCGCCGCGCT GATGGATAAG CCGGTTAAGC TGGCATCTCA CCGCGAATTC ACCACCTGGC GTGCAGAGCT GGATGGTAAA CCTGTTATCG TCTGCTCTAC CGGTATCGGC GGCCCGTCTA CCTCTATTGC TGTTGAAGAG CTGGCACAGC TGGGCATTCG CACCTTCCTG CGTATCGGTA CAACGGGCGC TATTCAGCCG CATATTAATG TGGGTGATGT CCTGGTTACC ACGGCGTCTG TCCGTCTGGA TGGCGCGAGC CTGCACTTCG CACCGCTGGA ATTCCCGGCT GTCGCTGATT TCGAATGTAC GACTGCGCTG GTTGAAGCTG CGAAATCCAT TGGCGCGACA ACTCACGTTG GCGTGACAGC TTCTTCTGAT ACCTTCTACC CAGGTCAGGA ACGTTACGAT ACTTACTCTG GTCGCGTAGT TCGTCACTTT AAAGGTTCTA TGGAAGAGTG GCAGGCGATG GGCGTAATGA ACTATGAAAT GGAATCTGCA ACCCTGCTGA CCATGTGTGC AAGTCAGGGC CTGCGTGCCG GTATGGTAGC GGGTGTTATC GTTAACCGCA CCCAGCAAGA GATCCCGAAT GCTGAGACGA TGAAACAAAC TGAAAGCCAA GCGGTGAAAA TCGTGGTGGA AGCGGCGCGT CGTCTGCTGT AA
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Protein sequence | MSKSDVFHLG LTKNDLQGAT LAIVPGDPDR VEKIAALMDK PVKLASHREF TTWRAELDGK PVIVCSTGIG GPSTSIAVEE LAQLGIRTFL RIGTTGAIQP HINVGDVLVT TASVRLDGAS LHFAPLEFPA VADFECTTAL VEAAKSIGAT THVGVTASSD TFYPGQERYD TYSGRVVRHF KGSMEEWQAM GVMNYEMESA TLLTMCASQG LRAGMVAGVI VNRTQQEIPN AETMKQTESQ AVKIVVEAAR RLL
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