Gene EcolC_4151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_4151 
SymbolengB 
ID6066397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4581261 
End bp4581893 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content52% 
IMG OID641603573 
Productribosome biogenesis GTP-binding protein YsxC 
Protein accessionYP_001727075 
Protein GI170022121 
COG category[R] General function prediction only 
COG ID[COG0218] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00165882 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0158227 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTAATT TGAATTATCA ACAGACGCAT TTTGTGATGA GTGCGCCTGA TATTCGCCAC 
CTACCTTCCG ATACCGGAAT TGAAGTGGCT TTTGCAGGCC GTTCCAACGC AGGTAAATCC
AGCGCGCTGA ACACGCTGAC TAACCAGAAA AGCCTGGCTC GTACCTCAAA AACCCCAGGG
CGCACCCAGC TTATCAACCT GTTTGAAGTG GCTGACGGCA AGCGTCTGGT TGACTTGCCT
GGGTACGGTT ATGCGGAAGT CCCGGAAGAG ATGAAGCGCA AATGGCAGCG TGCGCTCGGC
GAATACCTCG AAAAACGTCA GAGCCTGCAA GGTCTGGTGG TGCTAATGGA TATTCGCCAT
CCGCTGAAAG ATTTGGATCA GCAGATGATT GAGTGGGCGG TAGACAGCAA TATCGCCGTT
CTGGTGCTGC TGACCAAAGC GGACAAACTG GCAAGCGGCG CACGTAAAGC GCAATTGAAT
ATGGTGCGTG AAGCTGTACT GGCGTTTAAC GGTGATGTGC AGGTTGAAAC GTTTTCTTCG
TTGAAGAAAC AAGGCGTGGA CAAGCTGCGG CAGAAACTGG ATACCTGGTT TAGCGAGATG
CAGCCTGTAG AAGAAACGCA GGACGGCGAA TAA
 
Protein sequence
MTNLNYQQTH FVMSAPDIRH LPSDTGIEVA FAGRSNAGKS SALNTLTNQK SLARTSKTPG 
RTQLINLFEV ADGKRLVDLP GYGYAEVPEE MKRKWQRALG EYLEKRQSLQ GLVVLMDIRH
PLKDLDQQMI EWAVDSNIAV LVLLTKADKL ASGARKAQLN MVREAVLAFN GDVQVETFSS
LKKQGVDKLR QKLDTWFSEM QPVEETQDGE