Gene EcolC_4143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_4143 
Symbol 
ID6066295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4569923 
End bp4570903 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content44% 
IMG OID641603564 
Productxylose isomerase domain-containing protein 
Protein accessionYP_001727067 
Protein GI170022113 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.805588 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGACAA TAAATAACGC AAGAAAGATT CTACAACGTG TCGATACTCT TCCTCTTTAT 
TTACATGCCT ATGCCTTTCA TTTAAATATG CGGCTGGAAA GAGTATTGCC TGCTGATTTA
CTTGATATCG CGAGTGAAAA TAATCTGCGG GGCGTCAAAA TTCATGTTCT GGATGGAGAG
CGTTTTTCTC TTGGTAATAT GGACGATAAA GAACTCTCTG CCTTTGGTGA TAAAGCCCGC
CGTCTGAACC TTGATATTCA TATTGAAACC AGCGCCTCAG ATAAGGCATC TATTGACGAA
GCCGTCGCCA TCGCGTTGAA AACTGGGGCA TCGTCCGTAC GTTTTTATCC ACGTTATGAA
GGTAATTTGC GCGACGTATT ATCGATCATC GCTAACGACA TTGCCTATGT ACGGGAAACG
TATCAGGACA GCGGCCTGAC TTTTACGATC GAGCAGCATG AAGATTTAAA AAGCCATGAG
CTGGTGTCGT TGGTCAAAGA AAGTGAGATG GAGTCTCTTT CCTTACTGTT TGATTTTGCG
AACATGATCA ATGCAAATGA GCATCCCATC GACGCTTTAA AAACGATGGC GCCGCATATT
ACCCAGGTGC ATATCAAAGA TGCATTGATT GTTAAAGAAC AGGGTGGTCT GGGCCATAAA
GCCTGTATTT CAGGTCAGGG AGATATGCCC TTCAAAGCGT TATTAACGCA CCTTATCTGC
CTGGGCGATG ATGAGCCGCA GGTGACGGCA TATGGCCTGG AAGAAGAGGT TGATTATTAT
GCTCCGGCGT TCCGCTTTGA AGACGAAGAT GATAATCCGT GGATCCCTTA TCGCCAGATG
AGTGAAACAC CACTACCAGA AAATCATTTA CTGGATGCGC GGTTACGTAA AGAAAAAGAA
GATGCGATTA ATCAGATAAA TCATGTGCGT AACGTACTAC AACAAATCAA ACAAGAGGCA
AGCCATCTTC TGAACCACTA A
 
Protein sequence
MVTINNARKI LQRVDTLPLY LHAYAFHLNM RLERVLPADL LDIASENNLR GVKIHVLDGE 
RFSLGNMDDK ELSAFGDKAR RLNLDIHIET SASDKASIDE AVAIALKTGA SSVRFYPRYE
GNLRDVLSII ANDIAYVRET YQDSGLTFTI EQHEDLKSHE LVSLVKESEM ESLSLLFDFA
NMINANEHPI DALKTMAPHI TQVHIKDALI VKEQGGLGHK ACISGQGDMP FKALLTHLIC
LGDDEPQVTA YGLEEEVDYY APAFRFEDED DNPWIPYRQM SETPLPENHL LDARLRKEKE
DAINQINHVR NVLQQIKQEA SHLLNH