| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_4135 |
|---|
| Symbol | |
|---|
| ID | 6066227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 4560764 |
|---|
| End bp | 4562113 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641603556 |
|---|
| Product | general substrate transporter |
|---|
| Protein accession | YP_001727059 |
|---|
| Protein GI | 170022105 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAA AGTTACCCGC ACCGCGTGAA GGGCTTTCCG GTAAAGCCAT GAGACGTGTC
GTTATGGGCA GTTTCGCAGG CGCGTTAATG GAATGGTATG ACTTCTTTAT TTTTGGCACG
GCAGCAGGAC TGGTATTTGC ACCGCTGTTT TATCCAGACA GCGATCCTTT TATAGGTCTT
ATAGCCGCCT TTGCTACCTT TGGCGTTGGT TTTTTGACCC GTCCTTTAGG TGGTATCGTC
TTTGGCCATT TTGGCGATAA AATTGGGCGA AAAATAACAC TTATCTGGAC ACTGGCTATT
GTCGGTTGCT CCACATTTTT GATTGGTTTT ATTCCGACGT ATCAGGAAAT TGGGATCTGG
GCACCGCTCA TATTAATGGC GCTGCGTTTA ATTCAGGGCT TTGGTCTTGG TGGCGAGTAT
GGCGGAGCGG CATTGATGAC CATAGAATCA GCGCCCGAAT CCCGACGCGG ATTTTTAGGT
TCACTCCCGC AAACGGCTGC GTCTGTGGGT ATTATGCTGG CAACCGGTAT TTTTGCTCTC
TGTAACCATT TTCTTACTTC GGAGCAGTTT CTCTCCTGGG GATGGCGCAT TCCGTTTTGG
CTTTCTGCGG TGATGTTGAT CGTTGGGCTG TTTATCCGCC TGCATACCGA AGAAACGCTG
GATTTTCAAA AGCAAAAAAC GACGAATAAT AAAGAAAAGT CCGTTCCTCC GTTGATTGAA
TTATTCAAAA AACATCCACG AAATATTTTA TTGGCACTGG GTGCGAGGCT GGCGGAAAGT
GTCTCCTCTA ATATTATTAA CGCCTTTGGT ATTGTCTATA TTTCCAGCCA ATTAGCATTG
TCGCGAGATA TTCCCCTGAC GGGTATGTTG ATTGCCTCGG CGATCGGTAT TTTCAGTTGT
CCATTGGTTG GATGGTTATC AGATCGTATA GGTCAAAAAA GTCTGTATTT GTCGGGAGCA
GGATTTTGTG TCCTGTTCGC GTTTCCTTTC TTCTTATTAC TGGATAGCAA AAGTACGCTC
ATCATCTGGT GCAGTATGAT CCTCGGCTAC AACTTAGGTC CGACGATGAT GTTTGCCGTG
CAGCCAACAC TTTTCACCCG CATGTTCGGT ACCAAAGTAC GATATACCGG CCTTTCTTTT
GCTTATCAAT TTTCCGCGAT TCTTGGCGGA CTAAGCCCCC TTATCGCCTC AAGTTTGCTG
GCGCTAGGGG GAGGAAAACC GTGGTATGTC GCTCTGTTTT TATTTGCTGT CTCAGTTCTT
TCCTTTGTTT GCATCTGGCT GATTGAGCCG ACCGATGAAC AAGAAACCGC TTCTTACCGC
TACATCAGGG AACAATCTCA TGAAAACTGA
|
|---|
| Protein sequence | MSEKLPAPRE GLSGKAMRRV VMGSFAGALM EWYDFFIFGT AAGLVFAPLF YPDSDPFIGL
IAAFATFGVG FLTRPLGGIV FGHFGDKIGR KITLIWTLAI VGCSTFLIGF IPTYQEIGIW
APLILMALRL IQGFGLGGEY GGAALMTIES APESRRGFLG SLPQTAASVG IMLATGIFAL
CNHFLTSEQF LSWGWRIPFW LSAVMLIVGL FIRLHTEETL DFQKQKTTNN KEKSVPPLIE
LFKKHPRNIL LALGARLAES VSSNIINAFG IVYISSQLAL SRDIPLTGML IASAIGIFSC
PLVGWLSDRI GQKSLYLSGA GFCVLFAFPF FLLLDSKSTL IIWCSMILGY NLGPTMMFAV
QPTLFTRMFG TKVRYTGLSF AYQFSAILGG LSPLIASSLL ALGGGKPWYV ALFLFAVSVL
SFVCIWLIEP TDEQETASYR YIREQSHEN
|
|---|
| |