| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_4125 |
|---|
| Symbol | |
|---|
| ID | 6066050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 4552541 |
|---|
| End bp | 4553443 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641603546 |
|---|
| Product | formate dehydrogenase, beta subunit |
|---|
| Protein accession | YP_001727049 |
|---|
| Protein GI | 170022095 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
|---|
| TIGRFAM ID | [TIGR01582] formate dehydrogenase, beta subunit, Fe-S containing |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTATC AATCTCAAGA TATCATTCGT CGTTCCGCGA CTAACGGTCT GACCCCCGCG
CCTCAGGCGC GGGACTTCCA GGAAGAAGTG GCGAAACTCA TCGACGTTAC CACCTGTATC
GGCTGTAAAG CCTGTCAGGT GGCGTGTTCA GAGTGGAACG ACATTCGCGA TACCGTCGGC
AATAACATTG GGGTGTACGA CAACCCCAAT GATTTAAGCG CCAAATCGTG GACGGTAATG
CGCTTCTCGG AAGTGGAGCA GAACGACAAA CTGGAATGGC TGATCCGCAA AGACGGCTGT
ATGCACTGTT CCGATCCAGG CTGCCTGAAA GCGTGCCCGG CGGAAGGTGC AATTATTCAG
TATGCCAACG GTATCGTCGA CTTCCAGTCC GAGCAGTGCA TTGGCTGCGG TTATTGCATT
GCGGGCTGTC CGTTCGACAT TCCGCGCCTC AACCCGGAAG ACAACCGCGT CTACAAATGT
ACGCTGTGCG TTGACCGCGT GGTGGTTGGG CAAGAACCAG CCTGCGTGAA GACCTGCCCA
ACGGGCGCGA TTCACTTCGG TACGAAAGAG TCGATGAAAA CGCTGGCGAG CGAGCGCGTT
GCTGAGCTGA AAACCCGCGG TTACGACAAT GCGGGTCTGT ACGATCCGGC AGGCGTCGGT
GGTACACACG TCATGTACGT GCTGCACCAT GCTGACAAGC CAAATCTGTA TCATGGCTTG
CCGGAGAACC CGGAAATCAG CGAAACCGTG AAATTCTGGA AAGGCATCTG GAAACCGCTC
GCGGCTGTTG GCTTTGCGGC TACCTTTGCG GCCAGTATCT TCCACTACGT GGGTGTCGGT
CCGAACCGTG CGGATGAGGA AGAGAATAAT CTGCACGAAG AGAAAGACGA GGAGCGCAAA
TGA
|
|---|
| Protein sequence | MAYQSQDIIR RSATNGLTPA PQARDFQEEV AKLIDVTTCI GCKACQVACS EWNDIRDTVG
NNIGVYDNPN DLSAKSWTVM RFSEVEQNDK LEWLIRKDGC MHCSDPGCLK ACPAEGAIIQ
YANGIVDFQS EQCIGCGYCI AGCPFDIPRL NPEDNRVYKC TLCVDRVVVG QEPACVKTCP
TGAIHFGTKE SMKTLASERV AELKTRGYDN AGLYDPAGVG GTHVMYVLHH ADKPNLYHGL
PENPEISETV KFWKGIWKPL AAVGFAATFA ASIFHYVGVG PNRADEEENN LHEEKDEERK
|
|---|
| |