Gene EcolC_4116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_4116 
Symbol 
ID6065994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4541862 
End bp4542176 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content51% 
IMG OID641603538 
ProductL-rhamnose 1-epimerase 
Protein accessionYP_001727041 
Protein GI170022087 
COG category[S] Function unknown 
COG ID[COG3254] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02625] L-rhamnose 1-epimerase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCA AAGCCTTTGT CATGCAGGTA AACCCCGACG CCCACGAAGA GTATCAGCGT 
CGGCATAATC CCATCTGGCC AGAACTGGAA GCAGTGCTGA AATCTCACGG TGCGCATAAC
TACGCCATCT ATCTCGACAA AGCGCGTAAT CTGCTGTTTG CCATGGTAGA GATTGAATCT
GAAGAACGCT GGAATGCGGT TGCCAGTACT GATGTTTGCC AACGTTGGTG GAAATACATG
ACCGATGTTA TGCCCGCTAA CCCGGATAAC AGCCCGGTGA GTAGCGAGCT GCAAGAAGTG
TTTTACCTGC CGTAA
 
Protein sequence
MIRKAFVMQV NPDAHEEYQR RHNPIWPELE AVLKSHGAHN YAIYLDKARN LLFAMVEIES 
EERWNAVAST DVCQRWWKYM TDVMPANPDN SPVSSELQEV FYLP