| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_4114 |
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| Symbol | |
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| ID | 6065949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 4539318 |
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| End bp | 4540577 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641603536 |
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| Product | L-rhamnose isomerase |
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| Protein accession | YP_001727039 |
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| Protein GI | 170022085 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4806] L-rhamnose isomerase |
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| TIGRFAM ID | [TIGR01748] L-rhamnose isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.937168 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACTC AACTGGAACA GGCCTGGGAG CTAGCGAAAC AGCGTTTCGC GGCGGTGGGG
ATTGATGTCG AGGAGGCGCT GCGCCAACTT GATCGTTTAC CCGTTTCAAT GCACTGCTGG
CAGGGCGATG ATGTTTCCGG TTTTGAAAAC TCGGAAGGTT CGCTGACCGG GGGGATTCAG
GCCACAGGCA ATTATCCGGG CAAAGCGCGT AATGCCAGTG AGCTACGTGC CGATCTGGAA
CAGGCTATGC GGCTGATTCC GGGGCCGAAA CGGCTTAATT TACATGCCAT CTATCTGGAA
TCAGATACGC CAGTCTCGCG CGACCAGATC AAACCAGAGC ACTTCAAAAA CTGGGTTGAA
TGGGCGAAAG CCAATCAGCT CGGTCTGGAT TTTAACCCCT CCTGCTTTTC GCATCCGCTA
AGCGCCGATG GCTTTACGCT TTCCCATGCC GACGACAGCA TTCGCCAGTT CTGGATTGAT
CACTGCAAAG CCAGCCGTCG CGTTTCGGCC TATTTTGGCG AGCAACTCGG CACACCATCG
GTGATGAACA TCTGGATCCC GGATGGTATG AAAGATATCA CCGTTGACCG TCTCGCCCCG
CGTCAGCGTC TGCTGGCAGC ACTGGATGAG GTGATCAGCG AGAAGCTAAA CCCTGCGCAC
CATATCGACG CCGTTGAGAG CAAATTGTTT GGCATTGGCG CAGAGAGCTA CACGGTTGGC
TCCAATGAGT TTTACATGGG GTATGCCACC AGCCGCCAGA CTGCGCTGTG CCTGGACGCC
GGGCACTTCC ACCCGACTGA AGTGATTTCC GACAAGATTT CCGCCGCCAT GCTGTATGTG
CCGCAGTTGC TGCTGCACGT CAGCCGTCCG GTTCGCTGGG ACAGCGATCA CGTAGTGCTG
CTGGATGATG AAACCCAGGC AATTGCCAGT GAGATTGTGC GTCACGATCT GTTTGACCGG
GTGCATATCG GCCTTGACTT CTTCGATGCC TCTATCAACC GCATTGCCGC GTGGGTCATT
GGTACACGCA ATATGAAAAA AGCCCTGCTG CGTGCGTTGC TGGAACCTAC CGCTGAGCTG
CGCAAGCTGG AAGCGGCGGG CGATTACACT GCGCGTCTGG CACTGCTGGA AGAGCAGAAA
TCGTTGCCGT GGCAGGCGGT CTGGGAAATG TATTGCCAAC GTCACGATAC GCCAGCAGGT
AGCGAATGGC TGGAGAGCGT GCGGGCTTAT GAGAAAGAAA TTTTGAGTCG CCGCGGGTAA
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| Protein sequence | MTTQLEQAWE LAKQRFAAVG IDVEEALRQL DRLPVSMHCW QGDDVSGFEN SEGSLTGGIQ
ATGNYPGKAR NASELRADLE QAMRLIPGPK RLNLHAIYLE SDTPVSRDQI KPEHFKNWVE
WAKANQLGLD FNPSCFSHPL SADGFTLSHA DDSIRQFWID HCKASRRVSA YFGEQLGTPS
VMNIWIPDGM KDITVDRLAP RQRLLAALDE VISEKLNPAH HIDAVESKLF GIGAESYTVG
SNEFYMGYAT SRQTALCLDA GHFHPTEVIS DKISAAMLYV PQLLLHVSRP VRWDSDHVVL
LDDETQAIAS EIVRHDLFDR VHIGLDFFDA SINRIAAWVI GTRNMKKALL RALLEPTAEL
RKLEAAGDYT ARLALLEEQK SLPWQAVWEM YCQRHDTPAG SEWLESVRAY EKEILSRRG
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