| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_4109 |
|---|
| Symbol | |
|---|
| ID | 6065910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 4533870 |
|---|
| End bp | 4534490 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641603531 |
|---|
| Product | superoxide dismutase |
|---|
| Protein accession | YP_001727034 |
|---|
| Protein GI | 170022080 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0605] Superoxide dismutase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.248521 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTATA CCCTGCCATC CCTGCCGTAT GCTTACGATG CCCTGGAACC GCACTTCGAT
AAGCAGACCA TGGAAATCCA CCACACCAAA CACCATCAGA CCTACGTAAA CAACGCCAAC
GCGGCGCTGG AAAGCCTGCC AGAATTTGCC AACCTGCCGG TTGAAGAGCT GATCACCAAA
CTGGACCAGC TGCCAGCAGA CAAGAAAACC GTACTGCGCA ACAACGCTGG CGGTCACGCT
AACCACAGCC TGTTCTGGAA AGGTCTGAAA AAAGGCACCA CCCTGCAGGG TGACCTGAAA
GCGGCTATCG AACGTGACTT CGGCTCCGTT GATAACTTCA AAGCAGAATT TGAAAAAGCG
GCAGCTTCCC GCTTTGGTTC CGGCTGGGCA TGGCTGGTGC TGAAAGGCGA TAAACTGGCG
GTGGTTTCTA CTGCTAACCA GGATTCTCCG CTGATGGGTG AAGCTATTTC TGGCGCTTCC
GGCTTCCCGA TTATGGGCCT GGATGTGTGG GAACATGCTT ACTACCTGAA ATTCCAGAAC
CGCCGTCCGG ACTACATTAA AGAGTTCTGG AACGTGGTGA ACTGGGACGA AGCAGCGGCA
CGTTTTGCGG CGAAAAAATA A
|
|---|
| Protein sequence | MSYTLPSLPY AYDALEPHFD KQTMEIHHTK HHQTYVNNAN AALESLPEFA NLPVEELITK
LDQLPADKKT VLRNNAGGHA NHSLFWKGLK KGTTLQGDLK AAIERDFGSV DNFKAEFEKA
AASRFGSGWA WLVLKGDKLA VVSTANQDSP LMGEAISGAS GFPIMGLDVW EHAYYLKFQN
RRPDYIKEFW NVVNWDEAAA RFAAKK
|
|---|
| |