Gene EcolC_4078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_4078 
Symbol 
ID6065575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4503934 
End bp4504542 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content52% 
IMG OID641603501 
Productputative peptidoglycan peptidase 
Protein accessionYP_001727004 
Protein GI170022050 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA GGCTGCTGAT CCTCAGCCTG CTGGTTTCTG TACCTGCCTT TGCCTGGCAG 
CCACAAACCG GCGACATCAT CTTTCAGATC TCTCGCTCAT CGCAAAGTAA AGCGATCCAA
CTGGCGACCC ATTCCGATTA TAGCCACACC GGTATGCTGG TGATACGCAA CAAAAAGCCC
TACGTTTTTG AAGCGGTCGG CCCGGTGAAA TACACCCCGC TCAAGCAGTG GATCGCCCAT
GGTGAAAAGG GCAAATACGT TGTTCGCCGC GTTGAAGGCG GACTGAGTGT TGAACAACAG
CAAAAACTGG CGCAAACGGC AAAACGTTAT CTCGGTAAAC CGTATGATTT CAGCTTCTCA
TGGAGCGACG ATCGCCAGTA CTGTTCGGAA GTGGTGTGGA AGGTTTACCA GAACGCGCTG
GGAATGCGCG TGGGCGAGCA GCAGAAGTTG AAAGAGTTCG ATCTCAGCAA CCCGCTGGTC
CAGGCTAAGC TCAAAGAACG CTACGGCAAA AATATTCCGC TTGAGGAAAC GGTAGTTTCA
CCACAAGCCG TTTTCGACGC GCCACAACTC ACCACAGTCG CCAAAGAGTG GCCGCTGTTT
TCGTGGTAA
 
Protein sequence
MKNRLLILSL LVSVPAFAWQ PQTGDIIFQI SRSSQSKAIQ LATHSDYSHT GMLVIRNKKP 
YVFEAVGPVK YTPLKQWIAH GEKGKYVVRR VEGGLSVEQQ QKLAQTAKRY LGKPYDFSFS
WSDDRQYCSE VVWKVYQNAL GMRVGEQQKL KEFDLSNPLV QAKLKERYGK NIPLEETVVS
PQAVFDAPQL TTVAKEWPLF SW