Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_4055 |
Symbol | |
ID | 6065212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 4472667 |
End bp | 4473584 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641603478 |
Product | DNA-binding transcriptional regulator OxyR |
Protein accession | YP_001726981 |
Protein GI | 170022027 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.139508 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATTC GTGATCTTGA GTACCTGGTG GCATTGGCTG AACACCGCCA TTTTCGGCGT GCGGCAGATT CCTGCCACGT TAGCCAGCCG ACGCTTAGCG GGCAAATTCG TAAGCTGGAA GATGAGTTGG GCGTGATGTT GCTGGAGCGG ACCAGCCGTA AAGTGTTGTT CACCCAGGCG GGAATGCTGC TGGTGGATCA GGCGCGTACC GTGCTGCGTG AGGTGAAAGT CCTTAAAGAG ATGGCAAGCC AGCAGGGCGA GACGATGTCC GGACCGCTGC ATATTGGTTT GATTCCCACG GTTGGACCGT ACCTGCTACC GCATATTATC CCGATGCTGC ACCAGACCTT TCCAAAGCTG GAAATGTATC TGCATGAAGC ACAGACCCAC CAGTTACTGG CGCAACTGGA CAGTGGCAAA CTCGATTGCG TGATCCTCGC GCTGGTGAAA GAGAGCGAAG CATTCATTGA AGTGCCGTTG TTTGATGAGC CAATGTTGCT GGCTATCTAT GAAGATCACC CGTGGGCGAA CCGCGAATGC GTACCGATGG CCGATCTGGC AGGGGAAAAA CTGCTGATGC TGGAAGATGG TCACTGTTTG CGCGATCAGG CAATGGGTTT CTGCTTTGAA GCCGGGGCGG ATGAAGATAC ACACTTCCGC GCGACCAGCC TGGAGACACT GCGTAACATG GTGGCGGCAG GTAGCGGGAT CACTTTACTG CCTGCGCTGG CTGTGCCGCC GGAGCGCAAA CGCGATGGGG TTGTTTATTT GCCGTGTATT AAGCCGGAAC CTCGCCGCAC GATTGGCCTG GTTTATCGTC CTGGCTCACC GCTGCGCAGC CGCTATGAGC AGCTGGCAGA GGCCATCCGC GCAAGAATGG ATGGCCATTT CGATAAAGTG TTAAAACAGG CGGTTTAA
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Protein sequence | MNIRDLEYLV ALAEHRHFRR AADSCHVSQP TLSGQIRKLE DELGVMLLER TSRKVLFTQA GMLLVDQART VLREVKVLKE MASQQGETMS GPLHIGLIPT VGPYLLPHII PMLHQTFPKL EMYLHEAQTH QLLAQLDSGK LDCVILALVK ESEAFIEVPL FDEPMLLAIY EDHPWANREC VPMADLAGEK LLMLEDGHCL RDQAMGFCFE AGADEDTHFR ATSLETLRNM VAAGSGITLL PALAVPPERK RDGVVYLPCI KPEPRRTIGL VYRPGSPLRS RYEQLAEAIR ARMDGHFDKV LKQAV
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