| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_4054 |
|---|
| Symbol | |
|---|
| ID | 6065209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 4471284 |
|---|
| End bp | 4472684 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641603477 |
|---|
| Product | soluble pyridine nucleotide transhydrogenase |
|---|
| Protein accession | YP_001726980 |
|---|
| Protein GI | 170022026 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0478182 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACATT CCTACGATTA CGATGCCATA GTAATAGGTT CCGGCCCCGG CGGCGAAGGC
GCTGCAATGG GCCTGGTTAA GCAAGGTGCG CGCGTCGCAG TTATCGAGCG TTATCAAAAT
GTTGGCGGCG GTTGCACCCA CTGGGGCACC ATCCCGTCGA AAGCTCTCCG TCACGCCGTC
AGCCGCATTA TAGAATTCAA TCAAAACCCA CTATACAGCG ACCATTCCCG GCTGCTCCGC
TCTTCTTTTG CCGATATCCT TAACCATGCC GATAACGTGA TTAATCAACA AACGCGCATG
CGTCAGGGAT TTTACGAACG TAATCACTGT GAAATATTGC AGGGGAACGC TCGCTTTGTT
GATGAGCATA CGTTGGCGCT GGATTGCCCG GACGGCAGCG TTGAAACACT AACCGCTGAA
AAATTTATTA TTGCCTGCGG CTCTCGTCCA TATCATCCAA CAGATGTTGA TTTCACCCAT
CCACGCATTT ACGACAGCGA CTCAATTCTT AGCATGCACC ACGAACCGCG CCATGTACTT
ATCTATGGTG CTGGAGTGAT CGGCTGTGAA TATGCGTCGA TCTTCCGCGG TATGGATGTA
AAAGTGGATC TGATCAACAC CCGCGATCGG CTGCTGGCAT TTCTCGATCA AGAGATGTCA
GATTCTCTCT CCTATCACTT CTGGAACAGT GGCGTAGTGA TTCGCCACAA CGAAGAGTAC
GAGAAGATCG AAGGCTGTGA CGACGGTGTG ATCATGCATC TGAAGTCGGG TAAAAAACTG
AAAGCTGACT GCCTGCTCTA TGCCAACGGT CGCACCGGTA ATACTGATTC GCTGGCGTTA
CAGAACATTG GGCTGGAAAC TGACAGTCGC GGACAGCTGA AGGTCAACAG CATGTATCAG
ACCGCACAGC CGCACGTTTA CGCGGTGGGC GACGTGATTG GTTATCCGAG CCTGGCGTCG
GCGGCCTATG ACCAGGGGCG CATTGCCGCG CAGGCGCTGG TGAAAGGTGA AGCCACCGCA
CATCTGATTG AAGATATCCC TACCGGCATT TACACCATCC CGGAAATCAG CTCTGTGGGC
AAAACCGAAC AGCAGCTGAC CGCGATGAAA GTGCCATATG AAGTGGGCCG CGCCCAGTTC
AAACATCTGG CACGTGCACA AATCGTCGGC ATGAACGTGG GCACGCTGAA AATTTTGTTC
CATCGGGAAA CAAAAGAGAT TCTGGGCATT CACTGCTTTG GCGAGCGCGC TGCCGAAATT
ATTCATATCG GTCAGGCGAT TATGGAACAG AAAGGTGGCG GCAACACTAT TGAGTACTTC
GTCAACACCA CCTTTAACTA CCCGACGATG GCGGAAGCCT ATCGGGTAGC TGCGCTAAAT
GGCTTAAACC GCCTGTTTTA A
|
|---|
| Protein sequence | MPHSYDYDAI VIGSGPGGEG AAMGLVKQGA RVAVIERYQN VGGGCTHWGT IPSKALRHAV
SRIIEFNQNP LYSDHSRLLR SSFADILNHA DNVINQQTRM RQGFYERNHC EILQGNARFV
DEHTLALDCP DGSVETLTAE KFIIACGSRP YHPTDVDFTH PRIYDSDSIL SMHHEPRHVL
IYGAGVIGCE YASIFRGMDV KVDLINTRDR LLAFLDQEMS DSLSYHFWNS GVVIRHNEEY
EKIEGCDDGV IMHLKSGKKL KADCLLYANG RTGNTDSLAL QNIGLETDSR GQLKVNSMYQ
TAQPHVYAVG DVIGYPSLAS AAYDQGRIAA QALVKGEATA HLIEDIPTGI YTIPEISSVG
KTEQQLTAMK VPYEVGRAQF KHLARAQIVG MNVGTLKILF HRETKEILGI HCFGERAAEI
IHIGQAIMEQ KGGGNTIEYF VNTTFNYPTM AEAYRVAALN GLNRLF
|
|---|
| |