Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_4053 |
Symbol | |
ID | 6065202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 4470303 |
End bp | 4471007 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641603476 |
Product | DNA-binding transcriptional repressor FabR |
Protein accession | YP_001726979 |
Protein GI | 170022025 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.506107 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0185922 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCATTC TCTGGTATAG TGCCAGCAGT ACTTTTGGCA AGGATTCAGA CATCGTGATG GGCGTAAGAG CGCAACAAAA AGAAAAAACC CGCCGTTCGC TGGTGGAAGC CGCATTTAGC CAATTAAGTG CTGAACGCAG CTTCGCCAGC CTGAGTTTGC GTGAAGTGGC GCGTGAAGCG GGCATTGCTC CCACCTCTTT TTATCGGCAT TTCCGCGACG TAGACGAACT GGGTCTGACC ATGGTTGATG AGAGCGGTTT AATGCTACGC CAACTCATGC GCCAGGCGCG TCAGCGTATC GCCAAAGGCG GGAGTGTGAT CCGCACCTCG GTCTCCACAT TTATGGAGTT CATCGGTAAT AATCCTAACG CCTTCCGGTT ATTATTGCGG GAACGCTCCG GCACCTCCGC TGCGTTTCGT GCCGCCGTTG CGCGTGAAAT TCAGCACTTC ATTGCGGAAC TTGCGGACTA TCTGGAACTC GAAAACCATA TGCCGCGTGC GTTTACTGAA GCGCAAGCCG AAGCAATGGT GACAATTGTC TTCAGTGCGG GTGCCGAGGC GTTGGACGTC GGCGTCGAAC AACGTCGGCA ATTAGAAGAG CGACTGGTAC TGCAACTGCG AATGATTTCG AAAGGGGCTT ATTACTGGTA TCGCCGTGAA CAAGAGAAAA CCGCAATTAT TCCGGGAAAT GTGAAGGACG AGTAA
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Protein sequence | MFILWYSASS TFGKDSDIVM GVRAQQKEKT RRSLVEAAFS QLSAERSFAS LSLREVAREA GIAPTSFYRH FRDVDELGLT MVDESGLMLR QLMRQARQRI AKGGSVIRTS VSTFMEFIGN NPNAFRLLLR ERSGTSAAFR AAVAREIQHF IAELADYLEL ENHMPRAFTE AQAEAMVTIV FSAGAEALDV GVEQRRQLEE RLVLQLRMIS KGAYYWYRRE QEKTAIIPGN VKDE
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