Gene EcolC_4053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_4053 
Symbol 
ID6065202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4470303 
End bp4471007 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content53% 
IMG OID641603476 
ProductDNA-binding transcriptional repressor FabR 
Protein accessionYP_001726979 
Protein GI170022025 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.506107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0185922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCATTC TCTGGTATAG TGCCAGCAGT ACTTTTGGCA AGGATTCAGA CATCGTGATG 
GGCGTAAGAG CGCAACAAAA AGAAAAAACC CGCCGTTCGC TGGTGGAAGC CGCATTTAGC
CAATTAAGTG CTGAACGCAG CTTCGCCAGC CTGAGTTTGC GTGAAGTGGC GCGTGAAGCG
GGCATTGCTC CCACCTCTTT TTATCGGCAT TTCCGCGACG TAGACGAACT GGGTCTGACC
ATGGTTGATG AGAGCGGTTT AATGCTACGC CAACTCATGC GCCAGGCGCG TCAGCGTATC
GCCAAAGGCG GGAGTGTGAT CCGCACCTCG GTCTCCACAT TTATGGAGTT CATCGGTAAT
AATCCTAACG CCTTCCGGTT ATTATTGCGG GAACGCTCCG GCACCTCCGC TGCGTTTCGT
GCCGCCGTTG CGCGTGAAAT TCAGCACTTC ATTGCGGAAC TTGCGGACTA TCTGGAACTC
GAAAACCATA TGCCGCGTGC GTTTACTGAA GCGCAAGCCG AAGCAATGGT GACAATTGTC
TTCAGTGCGG GTGCCGAGGC GTTGGACGTC GGCGTCGAAC AACGTCGGCA ATTAGAAGAG
CGACTGGTAC TGCAACTGCG AATGATTTCG AAAGGGGCTT ATTACTGGTA TCGCCGTGAA
CAAGAGAAAA CCGCAATTAT TCCGGGAAAT GTGAAGGACG AGTAA
 
Protein sequence
MFILWYSASS TFGKDSDIVM GVRAQQKEKT RRSLVEAAFS QLSAERSFAS LSLREVAREA 
GIAPTSFYRH FRDVDELGLT MVDESGLMLR QLMRQARQRI AKGGSVIRTS VSTFMEFIGN
NPNAFRLLLR ERSGTSAAFR AAVAREIQHF IAELADYLEL ENHMPRAFTE AQAEAMVTIV
FSAGAEALDV GVEQRRQLEE RLVLQLRMIS KGAYYWYRRE QEKTAIIPGN VKDE