Gene EcolC_4012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_4012 
Symbol 
ID6064567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4410295 
End bp4411119 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content54% 
IMG OID641603423 
Producttranscriptional repressor IclR 
Protein accessionYP_001726938 
Protein GI170021984 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.992009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0359052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCAC CCATTCCCGC GAAACGCGGC AGAAAACCCG CCGTTGCCAC CGCACCAGCG 
ACTGGACAGG TTCAGTCTTT AACGCGTGGC CTGAAATTAC TGGAGTGGAT TGCCGAATCC
AATGGCAGTG TGGCACTCAC AGAGCTGGCG CAACAAGCCG GGTTACCCAA TTCCACGACC
CACCGCCTGC TAACCACGAT GCAACAGCAG GGTTTCGTGC GTCAGGTCGG CGAACTGGGA
CATTGGGCAA TCGGCGCACA TGCCTTTATG GTCGGCAGCA GCTTTCTCCA GAGCCGTAAT
TTGTTAGCGA TTGTTCACCC TATCCTGCGC AATTTAATGG AAGAGTCTGG CGAAACGGTC
AATATGGCGG TGCTTGATCA AAGCGATCAC GAAGCGATTA TTATCGACCA GGTACAGTGT
ACGCATCTGA TGCGAATGTC CGCGCCTATC GGCGGTAAAT TGCCGATGCA CGCTTCCGGT
GCGGGTAAAG CCTTTTTAGC CCAACTGAGC GAAGAACAGG TGACGAAGCT GCTGCACCGC
AAAGGGTTAC ATGCCTATAC CCACGCAACG CTGGTGTCTC CTGTGCATTT AAAAGAAGAT
CTCGCCCAAA CGCGCAAACG GGGTTATTCA TTTGACGATG AGGAACATGC ACTGGGGCTA
CGTTGCCTTG CAGCGTGTAT TTTCGATGAG CACCGCGAAC CGTTTGCCGC AATTTCAATT
TCCGGACCGA TTTCACGTAT TACCGATGAC CGCGTGACCG AGTTTGGCGC GATGGTGATT
AAAGCGGCGA AGGAAGTGAC GCTGGCGTAC GGTGGAATGC GCTGA
 
Protein sequence
MVAPIPAKRG RKPAVATAPA TGQVQSLTRG LKLLEWIAES NGSVALTELA QQAGLPNSTT 
HRLLTTMQQQ GFVRQVGELG HWAIGAHAFM VGSSFLQSRN LLAIVHPILR NLMEESGETV
NMAVLDQSDH EAIIIDQVQC THLMRMSAPI GGKLPMHASG AGKAFLAQLS EEQVTKLLHR
KGLHAYTHAT LVSPVHLKED LAQTRKRGYS FDDEEHALGL RCLAACIFDE HREPFAAISI
SGPISRITDD RVTEFGAMVI KAAKEVTLAY GGMR